DN621284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 54/136 (39.71%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 185 KMNELLSTDGQ-DFFTSYDEVYDS-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 583 K EL T G+ D SY ++ + F L+ LLR I GFE PS +QQ I +DV+ QA+SG GKTA F L QL+ +C LV+ TRELA QI+ YL VK GGT +++D Sbjct: 36 KDGELTVTGGRADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKD 171
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DRS1_NEUCR (ATP-dependent RNA helicase drs-1 OS=Neurospora crassa GN=drs-1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 179 DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 577 + KM E + + ++ E+ SF M L +LRG+ + GF KP+ IQ + I G DV+ A +G+GKTA F IL++L Y + + ++L PTRELA Q V L + +K VGG S++ Sbjct: 271 EAKMKEFFAPEEENQPKKKGEM-SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLK 405
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DRS1_DEBHA (ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii GN=DRS1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 46/161 (28.57%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 125 ADMAGLAPEGSQFDARQYDTKMNELLS--TDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQR 589 ADM P Q D + + ++ D ++ T+ +++ +F ++ L +L+G+ G+ KPS IQ I G D++ A +G+GKTA + I+++L Y + + +VLAPTRELA Q+ V + +G ++ + VGG ++R+ ++ Sbjct: 215 ADMDEEYPGSDQEDEKPVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQ 375
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTS 571 +F + + +LR I G+E P+AIQ I G DV+ AQ+GTGKTA F +L ++D QALVL PTRELA Q+ + G YL + V GG+S Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DDX49_DICDI (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum GN=ddx49 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 565 +F+ +GL L+ GF+ PS IQ I KG D+I A++G+GKTA+F IL QL A++L PTRELA QI + A+G + V +GG Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGG 109
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DDX19_DROME (DEAD-box helicase Dbp80 OS=Drosophila melanogaster GN=Dbp80 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRI 592 +F+A+ L+ +LL+GIYA GF PS IQ+ + ++I Q+QSGTGKTA F +L +++ L Q L L+PT ELA Q +V +G + +K+ V G V ++I Sbjct: 74 TFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKI 190
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DBP10_COCIM (ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis GN=DBP10 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 254 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 580 F AMGL NLL+ I GF P+ IQ++ I DV+ A++G+GKTA F ++++L V + L+L+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 83 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGSRGLILSPSRELALQTLKVVKELGRGTDLKCVLLVGGDSLEE 193
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: DBP10_ASPTN (ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp10 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 254 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL--DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 580 F AMGL NLL+ I GF P+ IQ++ I DV+ A++G+GKTA F ++++L + L+L+P+RELA Q KV++ LG +K VGG S+ E Sbjct: 91 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAFVIPMIEKLKSHSSKFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEE 201
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: RRP3_ASPTN (ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=rrp3 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 251 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 565 +F +G+ ++L G+ P+ IQ+R I +G D+I A++G+GKTA F +LQ L Q +L+LAPTRELAQQI + ALG + V+ +GG Sbjct: 29 TFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQALMDKPQQFHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGG 133
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: RH56_ARATH (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12 Identity = 46/104 (44.23%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 269 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVR 577 L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++ Q ALVL TRELA QI YL KV GG +++ Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIK 156 The following BLAST results are available for this feature:
BLAST of DN621284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621284 ID=DN621284; Name=DN621284; organism=Citrus sinensis; type=EST; length=594bpback to top |