DN621284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.655e-41 Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 25 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE 143
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.655e-41 Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++++E+ DSFD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 25 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE 143
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.669e-40 Identity = 77/119 (64.71%), Postives = 99/119 (83.19%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++YDE+ DSFD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDD 159
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.258e-40 Identity = 80/119 (67.23%), Postives = 96/119 (80.67%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 T+YDEV D+FD M L+ LLRGIYAYGFE+PSAIQQR I+P DV+ QAQSGTGKTATF +LQ++D L QCQAL+LAPTRELAQQI+KV+ ALGD + V+ HAC+GGT VR+D Sbjct: 12 TNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDD 130
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_ASPNC (ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif1 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.258e-40 Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 T+YDEV DSFD+M L+ LLRG+YAYGFE+PSAIQQR I P G DVI QAQSGTGKTATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D Sbjct: 18 TNYDEVTDSFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQKIDQELKACQALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDD 136
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39 Identity = 79/119 (66.39%), Postives = 95/119 (79.83%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++YDE+ + F+A+ L+ +LLRGI+AYGFEKPSAIQQRGI P G D I QAQSGTGKTATF LQ++DY L CQ L+LAPTRELAQQI+KV ALGDY ++ HACVGGTSVR+D Sbjct: 24 SNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDD 142
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_ASPTN (ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif1 PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39 Identity = 75/121 (61.98%), Postives = 99/121 (81.82%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 ++Y++V DSFD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL++APTRELAQQI+KV+ A+GD++ + HAC+GGT++R+D + Sbjct: 16 SNYEDVTDSFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQKIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMNINCHACIGGTAIRDDMK 136
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 2 Query: 200 LSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 L DG ++++EV D+FD M L+ LLRGIYAYGFE+PSAIQQR I+P G D I QAQSGTGKTATF ILQ++D + + QALVLAPTRELAQQI+KV+ ALGDYL V HACVGGT+VRED Sbjct: 12 LQIDGDLINSNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVRED 139
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.378e-39 Identity = 84/137 (61.31%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 179 DTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 D ++ ++ DG +YD+V +SFD M L+E LLRGIY +GFEKPSAIQ+R IVP G DVI QAQSGTGKTATF ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL V + C+GGTSVR+DQR Sbjct: 7 DVNVSSVVDADGL-IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39 Identity = 80/119 (67.23%), Postives = 95/119 (79.83%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 ++++E+ DS D M L E+LLRGIYAYGFEKPSAIQQR I+ KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Sbjct: 25 SNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE 143 The following BLAST results are available for this feature:
BLAST of DN621284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621284 ID=DN621284; Name=DN621284; organism=Citrus sinensis; type=EST; length=594bpback to top |