DN621284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_USTMA (ATP-dependent RNA helicase eIF4A OS=Ustilago maydis GN=TIF1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39 Identity = 82/131 (62.60%), Postives = 101/131 (77.10%), Query Frame = 2 Query: 191 NELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 N L DG+ ++++ V D+FD M L+E LLRG+YAYGFE+PSAIQ R IVP KG DVI QAQSGTGKTATF ILQ++D + QAL+LAPTRELAQQI+KV+ ALGDY+ + HAC+GGT+VRED Sbjct: 20 NNLNIADGE-IESNWETVIDNFDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHACIGGTNVRED 149
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38 Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 218 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIR 155
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38 Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 218 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIR 146
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.013e-38 Identity = 82/125 (65.60%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 218 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIR 155
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.629e-38 Identity = 77/132 (58.33%), Postives = 97/132 (73.48%), Query Frame = 2 Query: 197 LLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 592 L D T+YDEV SFD +GL++ LLRGIY YGFE PS+IQQR I+P KG DV+ QAQSGTGKTATF LQ +D + + QAL++APTRELA QI+KV+ A G+Y+ ++ HAC+GGTSV ED R+ Sbjct: 5 LTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRV 136
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.434e-38 Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 2 Query: 218 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQ+ I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPT+ELA+QI+KV+ ALGDY+ V+ HAC+GGT+V ED R Sbjct: 30 EFQTSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQIRETQALILAPTKELARQIQKVLLALGDYMNVQCHACIGGTNVGEDIR 154
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A3_SALSA (Eukaryotic initiation factor 4A-III OS=Salmo salar GN=eif4a3 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.485e-38 Identity = 81/125 (64.80%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 218 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ H+C+GGT+V ED R Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIR 146
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 80/117 (68.38%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 +V +FDAMGL+E+LLRGIYAY FEKPSAIQQR I+P +G DVI QAQSGTGKTATF +LQ +D L + QALVL+PTRELA QI+ V+ ALGDYL V+ HAC+GGTSV ED R Sbjct: 21 KVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIR 137
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A3_RAT (Eukaryotic initiation factor 4A-III OS=Rattus norvegicus GN=Eif4a3 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.105e-36 Identity = 86/154 (55.84%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 131 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 MA A + AR+ K ++ + F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R Sbjct: 1 MAATATMATSGSARKRLLKEEDMTKVE---FETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIR 151
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A3_PIG (Eukaryotic initiation factor 4A-III OS=Sus scrofa GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.105e-36 Identity = 86/154 (55.84%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 131 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 MA A + AR+ K ++ + F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R Sbjct: 1 MAATATMATSGSARKRLLKEEDMTKVE---FETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIR 151 The following BLAST results are available for this feature:
BLAST of DN621284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621284 ID=DN621284; Name=DN621284; organism=Citrus sinensis; type=EST; length=594bpback to top |