DN621284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.143e-33 Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 2 Query: 191 NELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 + + + + + T+YD++ FD + L+E LLRGIY YGF PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VKVHAC+GGT RED Sbjct: 3 DSITNPENSEIQTNYDKIVHKFDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQIQKVVMALALHMDVKVHACIGGTDPRED 133
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.547e-33 Identity = 71/130 (54.62%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 194 ELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 E D T+YD V SFD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D L QAL+LAPTRELA QI+ V+ +G YL V VHA +GGTS+++D Sbjct: 4 EFNEIDANTIETNYDNVVYSFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENLKATQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDD 133
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.344e-33 Identity = 71/125 (56.80%), Postives = 91/125 (72.80%), Query Frame = 2 Query: 209 DGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 D ++YD+V SFD + L+E LLRGI+ YGF +PSAIQQR I+P +G DV+ QAQSGTGKT TF LQ +D + Q L+LAPTRELA QI+KV+ AL ++ VKVHAC+GGTS++ED Sbjct: 9 DENQIQSTYDKVVYSFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQIQKVVMALAIHMDVKVHACIGGTSLQED 133
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 7.410e-33 Identity = 70/119 (58.82%), Postives = 89/119 (74.79%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 T+YD+V FD M L++ LL+G+Y YGFE+PSAIQQR I+P + DV+ QAQSGTGKT TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ VKVHAC+GGTS ED Sbjct: 16 TNYDKVVYKFDDMNLKDELLKGVYGYGFEEPSAIQQRAILPIVEEHDVLAQAQSGTGKTGTFSIAALQRIDSSIKAPQALILAPTRELALQIQKVVIALAFHMDVKVHACIGGTSFVED 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.264e-32 Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V+ +F++M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ +D CQAL+L+PTRELAQQI+ V++ LGDY+ V HAC+GGT V ED Sbjct: 23 KVHATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGED 137
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.816e-32 Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = 2 Query: 209 DGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 589 D +F TS D +V +F++M L+++LLRGIYAYGFE PSAIQ R I KG D I QAQSGTGKTATF +L+ +D + QA+VL+PTRELA QI+ V+ ALGDY+ V+ HAC+GGTS+ D + Sbjct: 10 DELEFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMK 137
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32 Identity = 65/115 (56.52%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V+ +F++M L+ +LL+GIY YGFE PSAIQ R I+ G D I QAQSGTGKTATF G+LQ +D CQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GGT V +D Sbjct: 23 KVHATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACIGGTHVGDD 137
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.273e-32 Identity = 67/119 (56.30%), Postives = 88/119 (73.95%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 T+YD V +FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ +G YL V VHA +GGTS+++D Sbjct: 16 TNYDNVVYTFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIQNVITHIGLYLNVTVHASIGGTSMKDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.193e-32 Identity = 67/119 (56.30%), Postives = 88/119 (73.95%), Query Frame = 2 Query: 227 TSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTATF LQ++D QAL+LAPTRELA QI+ V+ ++G YL V VHA +GGTS+++D Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDD 134
BLAST of DN621284 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.193e-32 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 2 Query: 239 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 583 +V+ +F++M L+ +LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF G+L+ +D +CQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GG +V ED Sbjct: 23 KVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGED 137 The following BLAST results are available for this feature:
BLAST of DN621284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 376
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621284 ID=DN621284; Name=DN621284; organism=Citrus sinensis; type=EST; length=594bpback to top |