DN621283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: DBP8_NEOFI (ATP-dependent RNA helicase dbp8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp8 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = -3 Query: 232 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 621 E A ++IF N + D L +R H V++ H + Q+ R+ + FR+ ++R+L+ TD+ +RG+D+ VSLVINYD+P P++Y+HR+GR+ R GR G AI V + D +++ I++ +EE Sbjct: 347 EDNASRPAIIFCNHTKTADLLERMLRRLTHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRSGEAITLVGQRDVQLVLAIEERVGRQMEE 476
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: DBP8_EMENI (ATP-dependent RNA helicase dbp8 OS=Emericella nidulans GN=dbp8 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 45/119 (37.82%), Postives = 80/119 (67.23%), Query Frame = -3 Query: 256 ITQS-VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 609 IT+S ++F NT + D L +RS H V++ H + Q+ R+ + FR+ ++RVL+ TD+ +RG+D+ VSLV+N+++P P++Y+HR+GR+ R GR G A+ V + D +++ I++ Sbjct: 349 ITKSAIVFTNTTKSADLLERLLRSLGHRVTSLHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRVGRTARAGRTGEAVTLVGQRDVQLVLAIEE 467
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: DBP8_ASPFU (ATP-dependent RNA helicase dbp8 OS=Aspergillus fumigatus GN=dbp8 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20 Identity = 44/123 (35.77%), Postives = 79/123 (64.23%), Query Frame = -3 Query: 232 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 600 +++F N + D L +R H V++ H + Q+ R+ + FR+ ++R+L+ TD+ +RG+D+ VSLVINYD+P P++Y+HR+GR+ R GR+G A+ V + D +++ I++ +EE Sbjct: 354 AIVFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRGLDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRRGEAVTLVGQRDVQLVLAIEERVGRQMEE 476
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = -3 Query: 205 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 747 + + PV + + I Q+Y + E K L L + T+S++FV R +V L + +R G+M Q R+ ++ G VL+ TD+ ARGID+ VS V N+D+P + YLHRIGR+ R GRKG AI+ V D +L + ++ + E + + V D L Sbjct: 202 RLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLLGKVGRY---IEEPIKARVIDEL 379
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: RHLB_SHEPA (ATP-dependent RNA helicase rhlB OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rhlB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 53/154 (34.42%), Postives = 88/154 (57.14%), Query Frame = -3 Query: 286 MNKPVRILVKRDELTLEGIKQ--FYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 741 MN+P ++ + +E T + IK+ FY ++E+ K+ L L E ++++F NT+ + + + H GD+ Q R I+ +F G +L+ TD+ ARG+ + VS V NYDLP E+Y+HRIGR+GR G+KGV+++F + Sbjct: 213 MNEPEKVEIAPNEKTSKNIKEEIFYPSMEE---KMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGDIDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEE 363
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: RH29_ORYSJ (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica GN=Os08g0416100 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 47/127 (37.01%), Postives = 77/127 (60.63%), Query Frame = -3 Query: 223 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPS 603 Q++IFV+T+ V++L R S ++G MDQ R+I + +FR+ + +LI TD+ ARG+D+ + V+N+D P +P+ ++HR+GR R GR G A FVT +D L D+ F + + P+ Sbjct: 294 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLSKPLRPAPT 420
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: RH29_ORYSI (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica GN=OsI_028228 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 47/127 (37.01%), Postives = 77/127 (60.63%), Query Frame = -3 Query: 223 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPS 603 Q++IFV+T+ V++L R S ++G MDQ R+I + +FR+ + +LI TD+ ARG+D+ + V+N+D P +P+ ++HR+GR R GR G A FVT +D L D+ F + + P+ Sbjct: 294 QTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLSKPLRPAPT 420
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: DED1_USTMA (ATP-dependent RNA helicase DED1 OS=Ustilago maydis GN=DED1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = -3 Query: 226 RKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELP 750 + F+ + V + V R T E I Q VE ++ + L L + ++IFV T+R D L+D + ++ HGD Q R+ + FRSG + +++ T + ARG+D+ V+ V+NYDLP+ ++Y+HRIGR+GR G G A F R ++ ++ D+ + +E+P Sbjct: 403 KDFLKEYVFLSVGRVGSTSENITQKIEYVEDDDKRSVLLDVLASMPSGGLTLIFVETKRMADMLSDFLLRSKIGATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNYDLPSDVDDYVHRIGRTGRAGNVGHATAFFNRGNKNIVRDLIELLKEANQEVP 577
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: DBP8_VANPO (ATP-dependent RNA helicase DBP8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP8 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = -3 Query: 232 KEEWKLETL-CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 660 KE + + L C+ Y+ ++ ++FVN + L +RS + V++ H M Q+ R ++ FR+ ++RVLI TD+ ARG+D+ V LVINYD+P P+ ++HR GR+ R GR G AI+FVT D + I++ N ++E Sbjct: 239 KEAYLYQLLTCEDYKDSSV---IVFVNRTTAAEVLRRTLRSLEVRVASLHSQMPQSERINSLQRFRANAARVLIATDVAARGLDIPTVELVINYDIPQDPDTFIHRSGRTARAGRSGDAISFVTPRDVSRIEAIEERINKKMDE 379
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: PRP5_CRYNE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans GN=PRP5 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.043e-20 Identity = 55/170 (32.35%), Postives = 91/170 (53.53%), Query Frame = -3 Query: 262 RKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT-------QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 750 R+ + KP+ I V + I Q V V + K L ++ + +++IFV+ + D L ++ R + ++ HG +Q RD ++ F++G +++ T + ARG+DV+++ LVINYD P E+Y+HR GR+GR G KG I F+T + ER DI Sbjct: 603 RRILVKPLEITVGGRSVVAPEIDQ-RVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRTLIFVDRQESADDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDI 771 The following BLAST results are available for this feature:
BLAST of DN621283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621283 ID=DN621283; Name=DN621283; organism=Citrus sinensis; type=EST; length=752bpback to top |