DN621283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 254.603 bits (649), Expect = 4.210e-67 Identity = 126/181 (69.61%), Postives = 152/181 (83.98%), Query Frame = -3 Query: 205 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 747 KFM PVRILVK+DELTLEGIKQFYVNVE+EE+K E L DLY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEELPS++A LL Sbjct: 214 KFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.210e-67 Identity = 126/181 (69.61%), Postives = 152/181 (83.98%), Query Frame = -3 Query: 205 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 747 KFM PVRILVK+DELTLEGIKQFYVNVE+EE+K E L DLY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D + +++KFY+ IEELPS++A LL Sbjct: 214 KFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDIATLL 394
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.210e-67 Identity = 122/180 (67.78%), Postives = 151/180 (83.89%), Query Frame = -3 Query: 208 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 747 KFMN PVRILVK+DELTLEGIKQFY+NVE+E++K + LCDLY+++++TQ+VIF NTR KV++LT K++ + TVSA H D+ Q RD IM EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE+P+++ L Sbjct: 216 KFMNNPVRILVKKDELTLEGIKQFYINVEQEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKGENFTVSAIHADLPQADRDTIMNEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDQDVGMMREIEKFYSTQIEEMPADIGAL 395
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 9.379e-67 Identity = 122/181 (67.40%), Postives = 152/181 (83.98%), Query Frame = -3 Query: 205 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 747 KFM KPVRIL+KRDELTL+GIKQF+V+VEKE+WK TLCD+Y++L ITQ+VIF NT++KVD LT++MR + TV++ HGDM Q R+ I++ FRSG +RVLITTD+LARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFV D R+L DI++FY+ I+E+P N A ++ Sbjct: 225 KFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVNFASII 405
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.225e-66 Identity = 121/180 (67.22%), Postives = 152/180 (84.44%), Query Frame = -3 Query: 208 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 747 KFMN PVRILVK+DELTLEGIKQFY+NVE E++K + LCDLY+++++TQ+VIF NTR KV++LT K+++ + TVSA H D+ Q RD IM+EFRSGSSR+LI TDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINFVT D M+ +I++FY+ IEE+P+++ L Sbjct: 216 KFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTERDVGMMREIEQFYSTQIEEMPADIGAL 395
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.600e-66 Identity = 122/163 (74.85%), Postives = 142/163 (87.12%), Query Frame = -3 Query: 259 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 747 KFM PVRILVKRDELTLEG+KQ+++ VEKE+WK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HGDM Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ Sbjct: 220 KFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIE 382
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.729e-66 Identity = 120/180 (66.67%), Postives = 153/180 (85.00%), Query Frame = -3 Query: 208 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 747 KFM P+RILVK+DELTLEGIKQFY+NVE+E++K + L DLY+++++TQ+VIF NTRRKV+ LT K+ + TVS+ + D+ Q RD+IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D + +I+KFY+ IEELP++VA++ Sbjct: 215 KFMRNPIRILVKKDELTLEGIKQFYINVEEEQYKFDCLSDLYDSISVTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMREIEKFYSTQIEELPADVAEM 394
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.655e-66 Identity = 119/181 (65.75%), Postives = 151/181 (83.43%), Query Frame = -3 Query: 205 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 747 KF PV+ILVKRD++TLEGIKQ+++ EKE+WK +TLCDLY++L ITQ+VIF NT+ KV+WLTD+M+ + TV A HGDM Q+ RD IM +FR+G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAIN VT++D L DI++FY + I+E+P NV D++ Sbjct: 219 KFTTDPVKILVKRDDITLEGIKQYHIQCEKEDWKFDTLCDLYDSLTITQAVIFCNTKVKVNWLTDQMKKANFTVVAMHGDMKQDERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYVHRIGRSGRFGRKGVAINLVTKEDVDELRDIERFYRIRIKEMPVNVNDIM 399
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 6.079e-66 Identity = 117/181 (64.64%), Postives = 149/181 (82.32%), Query Frame = -3 Query: 205 KFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 747 KF PV+ILVKRD++TLEGIKQ++V EKE+WK +TLCDLY+ L ITQ+VIF NT+ KV+WLTD+MR ++ TV + HGDM Q+ RD IM +FR+G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAIN +T++D L D +K+Y+ I E+P N+ D++ Sbjct: 219 KFTTDPVKILVKRDQITLEGIKQYHVQCEKEDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLTDQMRKQNFTVVSMHGDMKQDERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGVAINLITKEDVATLRDFEKYYSTKIREMPMNINDIM 399
BLAST of DN621283 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.310e-65 Identity = 115/181 (63.54%), Postives = 151/181 (83.43%), Query Frame = -3 Query: 208 RKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 750 +KFMN PV+ILVKRDE+TLEGIKQ+YVNVEKEEWK +TLCD+Y++L ITQ VIF N+++KVDWL K++ + V + HGDM Q+ RD +M EFR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D + +I+K+Y + ++ +P+++++L Sbjct: 218 KKFMNDPVKILVKRDEITLEGIKQYYVNVEKEEWKFDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVWARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLTKIDASRMKEIEKYYKIKVKPMPADLSEL 398 The following BLAST results are available for this feature:
BLAST of DN621283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621283 ID=DN621283; Name=DN621283; organism=Citrus sinensis; type=EST; length=752bpback to top |