DN621271

Overview
NameDN621271
Unique NameDN621271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 56/173 (32.37%), Postives = 101/173 (58.38%), Query Frame = -1
Query:  251 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQ-----WMAPEVLRNEPSDE-----KSDVYSFGVILWELATEKIPWDNL-NSMQVIGAVGFMNQ----RLEIPKDVDPR--WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 718
            +IA GV+YLH+ NPP++H DLK+ N+L+D  + VK+ DFGLS+ +  +   +++ K  P+     +M PE    EP  +     K D+YS+ VI+WE+ + K P++ + N +Q++ +V   ++       +P D+  R    ++++S W  +P  RPSF + + +L  + R +
Sbjct:  127 EIALGVNYLHNMNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSYKSAPEGGTIIYMPPE--NYEPGQKSRASVKHDIYSYAVIMWEVLSRKQPFEEVTNPLQIMYSVSQGHRPDTSEENLPFDIPHRGLMISLIQSGWAQNPDERPSFLKCLIELEPVLRTF 297          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = -1
Query:  212 MALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL--NSMQVI----GAVGFMNQRLE--IPKDVDP----------------RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQ 727
            +AL +A G++YLH+ C+PPI+HRD+K  N+L+D      +GDFGL+RL  ++ ++T T  GT  ++APE         +SDVYS+GV+L EL T K   D     S  ++     A+   N  +E  +   VDP                +   +  SC   DP  RP+ ++ V  L D++      +RS   DS +
Sbjct:  931 VALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDVK----HLARSCSSDSVR 1123          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_RHIFE (Hepatocyte growth factor receptor OS=Rhinolophus ferrumequinum GN=MET PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = -1
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR--LKHETY-LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+++TVKV DFGL+R     E Y +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1186 LQVAKGMKYL--ASKKFVHRDLAARNCMLDENFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDHLYEVMLKCWHPKAEQRPSFAELVSRI 1337          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_RABIT (Hepatocyte growth factor receptor OS=Oryctolagus cuniculus GN=MET PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDALYEVMLKCWHPKAEMRPSFSELVSRI 1338          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_MUNMU (Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR--LKHETY-LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R     E Y +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMEYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDALYEVMLKCWHPKAELRPSFSELVSRI 1338          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_MOUSE (Hepatocyte growth factor receptor OS=Mus musculus GN=Met PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 57/158 (36.08%), Postives = 90/158 (56.96%), Query Frame = -1
Query:  263 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++  +
Sbjct: 1184 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITIYL-LQGRRLLQPEYCPDALYEVMLKCWHPKAEMRPSFSELVSRISSI 1338          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: KRAF1_CAEEL (Raf homolog serine/threonine-protein kinase OS=Caenorhabditis elegans GN=lin-45 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 62/165 (37.58%), Postives = 98/165 (59.39%), Query Frame = -1
Query:  263 IARGVSYLHHCNPPIIHRDLKSSNL-LVDKHWTVKVGDFGLSRLKHETYLTTKTGK------GTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVG---FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 715
            ++ G++YLH  N  IIHRDLK++N+ L+D   TVK+GDFGL+ +K  T  T   G+      G+  WMAPEV+R   + P   +SDVYSFG+ ++E+ +  +P+ N+N+  Q++  VG       R +I  D       + ++C   D   RP F E++++LRD+
Sbjct:  586 VSLGMNYLHSKN--IIHRDLKTNNIFLMDDMSTVKIGDFGLATVK--TKWTVNGGQQQQQPTGSILWMAPEVIRMQDDNPYTPQSDVYSFGICMYEILSSHLPYSNINNRDQILFMVGRGYLRPDRSKIRHDTPKSMLKLYDNCIMFDRNERPVFGEVLERLRDI 746          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: KRAF1_CAEBR (Raf homolog serine/threonine-protein kinase OS=Caenorhabditis briggsae GN=lin-45 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 63/165 (38.18%), Postives = 98/165 (59.39%), Query Frame = -1
Query:  263 IARGVSYLHHCNPPIIHRDLKSSNL-LVDKHWTVKVGDFGLSRLKHETYLTTKTGK------GTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVG---FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 715
            ++ G++YLH  N  IIHRDLK++N+ L+D   TVK+GDFGL+ +K  T  T   G+      G+  WMAPEV+R   + P   +SDVYSFGV ++E+ +  +P+ N+N+  Q++  VG       R +I  D       + ++C   D   RP F E++++LRD+
Sbjct:  584 VSLGMNYLHSKN--IIHRDLKTNNIFLMDDMSTVKIGDFGLATVK--TKWTVNGGQQQQQPTGSILWMAPEVIRMQDDNPYTPQSDVYSFGVCMYEILSSHLPYSNINNRDQILFMVGRGYLKPDRSKIRTDTPKSLMKLYDNCIMFDRNERPVFGEVLERLRDI 744          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: Y9849_DICDI (Probable serine/threonine-protein kinase DDB_G0278535 OS=Dictyostelium discoideum GN=DDB_G0278535 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = -1
Query:  203 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG-KGTPQWMAPEVLRNEPS--DEKSDVYSFGVILWELATEKI------PWDNLNSMQVIGAVGFMNQ---RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQKEL 721
            + +  GV  LH+  P I+HRD KS NLLV++ W  KV DFGLSR      L T +  +GT  + +PEV     S    KSD+YS G++ WEL T  I      P+   + +++   +   ++   R  +P++  P   A+ + C + +   RPS +E+++ L  L+ +Y   S  T  DS  ++L
Sbjct:  630 MQMTLGVQCLHNWTPQIVHRDFKSLNLLVNEDWECKVSDFGLSRFNTADNLETLSKIRGTFAYCSPEVAVGNGSLYTTKSDIYSIGIVFWELVTRVINGEYSRPYSEYSHIKMDFQIMLNSKEGLRPTLPQNTPPGLEALYKQCVNQEQTLRPSCEEIIETLNRLRHEYM--SSKTTWDSLIRKL 812          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: PHG2_DICDI (Serine/threonine-protein kinase phg2 OS=Dictyostelium discoideum GN=phg2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 54/166 (32.53%), Postives = 87/166 (52.41%), Query Frame = -1
Query:  251 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---------SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 718
            ++  GV YLH  NPP++HRDLK+ N+L+   WT K+ DFGL+R    T ++T    +GT  + APE+      + KSDVYS GVI+WE     I    L           +Q+I        R +I ++   +   ++  CW  +P  RP+  E+++ L  +++ +
Sbjct:  911 EVVEGVRYLHSMNPPMVHRDLKTLNILISSDWTAKLCDFGLTRTMTMTNVSTLGMLRGTMAYTAPEIYDGLLFNTKSDVYSLGVIMWEAIQRCISGVYLRPFHEHPISMDIQIIILTSKNKVRPKISENCPEQLKTLITRCWDENPDKRPNCDEILEILLTMKQAH 1076          
The following BLAST results are available for this feature:
BLAST of DN621271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RIPK2_MOUSE1.381e-1932.37Receptor-interacting serine/threonine-protein kina... [more]
PEPR1_ARATH1.381e-1932.99Leucine-rich repeat receptor-like protein kinase P... [more]
MET_RHIFE1.381e-1938.06Hepatocyte growth factor receptor OS=Rhinolophus f... [more]
MET_RABIT1.381e-1936.77Hepatocyte growth factor receptor OS=Oryctolagus c... [more]
MET_MUNMU1.381e-1938.06Hepatocyte growth factor receptor OS=Muntiacus mun... [more]
MET_MOUSE1.381e-1936.08Hepatocyte growth factor receptor OS=Mus musculus ... [more]
KRAF1_CAEEL1.381e-1937.58Raf homolog serine/threonine-protein kinase OS=Cae... [more]
KRAF1_CAEBR1.381e-1938.18Raf homolog serine/threonine-protein kinase OS=Cae... [more]
Y9849_DICDI1.804e-1932.97Probable serine/threonine-protein kinase DDB_G0278... [more]
PHG2_DICDI1.804e-1932.53Serine/threonine-protein kinase phg2 OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621271 ID=DN621271; Name=DN621271; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTTATTTCTTTCATTGTCTGGTAGCTATGCGGCGCC
AATAGCACAAGCCTTTTGAGTGGCAAATCTGTTGTAACCAGCTGTTTACC
AGCCAAGAAAGTAAATCTTTTGTGAAAAATAATGCCTGATTCTTCTACTT
GCAATGACGTTGTTTCAGCAACGGAACAGGGAAACAATGTGAATATGGTC
TACAATTCCTTCTGGGTGCTATCTCCTACTGTTGATCGAGATGCCTGGAA
GTATTGTCTCTGCAGATCTCGAAGCTTGTCCACCAGTTCCTGGAATGATG
GCCTGCACTGTGGATCACTGTGCCAGCAGCTCTCAACTATAGCAGCCCAC
CGTGGATCCACATCTTTTGGGATCTCTAAGCGTTGGTTCATGAACCCTAC
AGCTCCAATCACCTGCATTGAGTTGAGATTATCCCAAGGGATCTTCTCAG
TGGCGAGCTCCCATAATATAACTCCAAAGCTGTATACATCAGACTTCTCA
TCGGAGGGTTCATTTCGGAGAACTTCCGGTGCCATCCATTGAGGAGTTCC
CTTCCCAGTCTTGGTGGTGAGATATGTCTCATGCTTCAGACGTGACAGAC
CAAAATCACCAACCTTGACAGTCCAGTGTTTATCAACTAGAAGATTTGAA
GACTTCAAATCGCGATGAATGATTGGTGGGTTGCAATGATGAAGATAACT
CACGCCACGTGCTATATCCAAAGCCAT
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