DN621271

Overview
NameDN621271
Unique NameDN621271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_SHEEP (Hepatocyte growth factor receptor OS=Ovis aries GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR--LKHETY-LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R     E Y +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMEYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_SAIBB (Hepatocyte growth factor receptor OS=Saimiri boliviensis boliviensis GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1186 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_PONAB (Hepatocyte growth factor receptor OS=Pongo abelii GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1186 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_PAPAN (Hepatocyte growth factor receptor OS=Papio anubis GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1186 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_PANTR (Hepatocyte growth factor receptor OS=Pan troglodytes GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1186 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_NEONE (Hepatocyte growth factor receptor OS=Neofelis nebulosa GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_MUSPF (Hepatocyte growth factor receptor OS=Mustela putorius furo GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_MICMU (Hepatocyte growth factor receptor OS=Microcebus murinus GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1338
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_LOXAF (Hepatocyte growth factor receptor OS=Loxodonta africana GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR--LKHETY-LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R     E Y +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1187 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1338
[Close]
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: MET_HYLLE (Hepatocyte growth factor receptor OS=Hylobates leucogenys GN=MET PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1 
Query:  272 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 721
            L +A+G+ YL   +   +HRDL + N ++D+ +TVKV DFGL+R  ++     +  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1186 LQVAKGMKYL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
The following BLAST results are available for this feature:
BLAST of DN621271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MET_SHEEP1.804e-1938.06Hepatocyte growth factor receptor OS=Ovis aries GN... [more]
MET_SAIBB1.804e-1936.77Hepatocyte growth factor receptor OS=Saimiri boliv... [more]
MET_PONAB1.804e-1936.77Hepatocyte growth factor receptor OS=Pongo abelii ... [more]
MET_PAPAN1.804e-1936.77Hepatocyte growth factor receptor OS=Papio anubis ... [more]
MET_PANTR1.804e-1936.77Hepatocyte growth factor receptor OS=Pan troglodyt... [more]
MET_NEONE1.804e-1936.77Hepatocyte growth factor receptor OS=Neofelis nebu... [more]
MET_MUSPF1.804e-1936.77Hepatocyte growth factor receptor OS=Mustela putor... [more]
MET_MICMU1.804e-1936.77Hepatocyte growth factor receptor OS=Microcebus mu... [more]
MET_LOXAF1.804e-1938.06Hepatocyte growth factor receptor OS=Loxodonta afr... [more]
MET_HYLLE1.804e-1936.77Hepatocyte growth factor receptor OS=Hylobates leu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621271 ID=DN621271; Name=DN621271; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTTATTTCTTTCATTGTCTGGTAGCTATGCGGCGCC
AATAGCACAAGCCTTTTGAGTGGCAAATCTGTTGTAACCAGCTGTTTACC
AGCCAAGAAAGTAAATCTTTTGTGAAAAATAATGCCTGATTCTTCTACTT
GCAATGACGTTGTTTCAGCAACGGAACAGGGAAACAATGTGAATATGGTC
TACAATTCCTTCTGGGTGCTATCTCCTACTGTTGATCGAGATGCCTGGAA
GTATTGTCTCTGCAGATCTCGAAGCTTGTCCACCAGTTCCTGGAATGATG
GCCTGCACTGTGGATCACTGTGCCAGCAGCTCTCAACTATAGCAGCCCAC
CGTGGATCCACATCTTTTGGGATCTCTAAGCGTTGGTTCATGAACCCTAC
AGCTCCAATCACCTGCATTGAGTTGAGATTATCCCAAGGGATCTTCTCAG
TGGCGAGCTCCCATAATATAACTCCAAAGCTGTATACATCAGACTTCTCA
TCGGAGGGTTCATTTCGGAGAACTTCCGGTGCCATCCATTGAGGAGTTCC
CTTCCCAGTCTTGGTGGTGAGATATGTCTCATGCTTCAGACGTGACAGAC
CAAAATCACCAACCTTGACAGTCCAGTGTTTATCAACTAGAAGATTTGAA
GACTTCAAATCGCGATGAATGATTGGTGGGTTGCAATGATGAAGATAACT
CACGCCACGTGCTATATCCAAAGCCAT
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