DN621271

Overview
NameDN621271
Unique NameDN621271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = -1
Query:  245 ALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 724
            +LD A G+SYL   N   IHRDL + N LV ++  +K+ DFG+SR +     ++   K  P +W APE L       +SDV+SFG++LWE  +  + P+  + + Q    V     R+  P+        I+  CW   P+ RP F EL  +L  ++++  Q
Sbjct:  665 SLDAASGMSYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQATEQVE-RGYRISAPQHCPEDIFKIMMKCWDYKPENRPKFSELQKELTVIKKKVTQ 823          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: FAK2_HUMAN (Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=PTK2B PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 56/156 (35.90%), Postives = 79/156 (50.64%), Query Frame = -1
Query:  263 ALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR-LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWE-LATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 724
            +L I + ++YL   N   +HRD+   N+LV     VK+GDFGLSR ++ E Y      +   +WM+PE +        SDV+ F V +WE L+  K P+  L +  VIG +     RL  P    P    ++  CW  DP  RP F ELV  L D+
Sbjct:  530 SLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 682          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: ERBB2_RAT (Receptor tyrosine-protein kinase erbB-2 OS=Rattus norvegicus GN=Erbb2 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = -1
Query:  257 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH--ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 721
            + IA+G+SYL      ++HRDL + N+LV     VK+ DFGL+RL    ET      GK   +WMA E +       +SDV+S+GV +WEL T    P+D + + ++   +    +RL  P         I+  CW  D +CRP F+ELV +   + R
Sbjct:  829 VQIAKGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMAR 983          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: EPHB3_DANRE (Ephrin type-B receptor 3 (Fragment) OS=Danio rerio GN=ephb3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = -1
Query:  272 MALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE-----TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 727
            M   IA G+ YL   N   +HRDL + N+LV+ +   KV DFGLSR   +     TY ++  GK   +W APE +        SDV+S+G+++WE+ +  E+  WD +++  V+ AV   + RL  P D       ++  CW  +   RP F ++V  L
Sbjct:  292 MLRGIAAGMKYLSDMN--YVHRDLAARNVLVNSNLVCKVSDFGLSRFLDDNSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERPYWD-MSNQDVMNAVE-QDYRLPPPMDCPAVLHQLMLECWVKERNMRPRFGQIVSTL 446          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: EPHA3_CHICK (Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 54/161 (33.54%), Postives = 81/161 (50.31%), Query Frame = -1
Query:  257 MALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH---ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWE-LATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 727
            M   IA G+ YL       +HRDL + N+L++ +   KV DFGLSR+     E   TT+ GK   +W +PE +        SD +S+G++LWE ++  + P+  ++   VI AV     RL  P D       ++  CW  D   RP F+++V  L  L R
Sbjct:  726 MLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDAWSYGIVLWEVMSYGERPYWEMSFQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 883          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = -1
Query:  449 MALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH--ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT 727
            +A D+ARG+ +LHH C P I+HRD+K+SN+L+DKH   +V DFGL+RL +  +++++T    GT  ++APE  +   +  + DVYS+GV+  ELAT
Sbjct:  918 IATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIA-GTIGYVAPEYGQTWQATTRGDVYSYGVLTMELAT 1012          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: UFO_MOUSE (Tyrosine-protein kinase receptor UFO OS=Mus musculus GN=Axl PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 52/154 (33.77%), Postives = 85/154 (55.19%), Query Frame = -1
Query:  266 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH--ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 718
            DIA G+ YL       IHRDL + N +++++ +V V DFGLS+  +  + Y   +  K   +W+A E L +     KSDV+SFGV +WE+AT  + P+  + + ++   +     RL+ P D      +++  CW  +P+ RPSF EL + L +
Sbjct:  649 DIASGMEYLS--TKRFIHRDLAARNCMLNENMSVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR-QGNRLKQPVDFLDGLYSLMSRCWELNPRDRPSFAELREDLEN 799          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 53/156 (33.97%), Postives = 86/156 (55.13%), Query Frame = -1
Query:  266 MALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 727
            MA  +A G+++L       IHRDL + N+LV +++  KV DFGL+RL  +   T   G   P +W APE         KSDV+SFG+++ E+ T+ +IP+  + + Q I  V    +   +P   +P +  ++++ W+ DP+ RP+F  L   L D
Sbjct:  340 MAAQVASGMAFLEAQG--YIHRDLAARNILVGENYICKVADFGLARLIEDDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVTKGRIPYPGMTNAQTIAEVEKGYRMPIMPGCPEPLYNIMLQT-WNKDPENRPTFDYLQGVLED 492          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: RON_MOUSE (Macrophage-stimulating protein receptor OS=Mus musculus GN=Mst1r PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = -1
Query:  263 LDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR--LKHETYLTT--KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 721
            L +A G+ YL       +HRDL + N ++D+ +TVKV DFGL+R  L  E Y     +  +   +WMA E L+      KSDV+SFGV+LWEL T    P+ +++   +   +    +RL  P+        ++  CW +DP  RP+F+ LV +++ +
Sbjct: 1167 LQVACGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARGVLDKEYYSVRQHRHARLPVKWMALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYPHIDPFDLSHFLA-QGRRLPQPEYCPDSLYHVMLRCWEADPAARPTFRALVLEVKQV 1321          
BLAST of DN621271 vs. ExPASy Swiss-Prot
Match: GDT9_DICDI (Probable serine/threonine-protein kinase gdt9 OS=Dictyostelium discoideum GN=gdt9 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 55/177 (31.07%), Postives = 85/177 (48.02%), Query Frame = -1
Query:  251 MALDIARGVSYLHHCNPPIIHRDLKSSNLLV-----DKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA-------------IVESCWHSDPQCRPSFQELVDKLRDLQRQY 727
            +A+DIARG  +LH C   IIHRDLK  N+LV     +     K+ DFG S+  +E         GTP +M+ E+L  +  D  +DVYSF V+ +E+  E++P+  +            +++ EIP  V   W               ++  CW   P   PSF E+V  L  + +++
Sbjct: 1416 IAIDIARGCQFLHQCG--IIHRDLKPDNVLVFDINHNAPVCAKISDFGTSKETNEFSNKNTNCVGTPIYMSNEILEKKTYDNSTDVYSFAVLFYEMMIEEVPFSEI------------DEKWEIPSKVISGWRPTKGLNSLDRDIKNLINICW--APHSLPSFDEIVFSLVKIFKRF 1576          
The following BLAST results are available for this feature:
BLAST of DN621271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FER_CANFA7.092e-1633.33Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
FAK2_HUMAN7.092e-1635.90Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=... [more]
ERBB2_RAT7.092e-1635.44Receptor tyrosine-protein kinase erbB-2 OS=Rattus ... [more]
EPHB3_DANRE7.092e-1633.96Ephrin type-B receptor 3 (Fragment) OS=Danio rerio... [more]
EPHA3_CHICK7.092e-1633.54Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3... [more]
Y1743_ARATH9.263e-1645.83Probable LRR receptor-like serine/threonine-protei... [more]
UFO_MOUSE9.263e-1633.77Tyrosine-protein kinase receptor UFO OS=Mus muscul... [more]
STK_HYDAT9.263e-1633.97Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]
RON_MOUSE9.263e-1634.18Macrophage-stimulating protein receptor OS=Mus mus... [more]
GDT9_DICDI9.263e-1631.07Probable serine/threonine-protein kinase gdt9 OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621271 ID=DN621271; Name=DN621271; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTTATTTCTTTCATTGTCTGGTAGCTATGCGGCGCC
AATAGCACAAGCCTTTTGAGTGGCAAATCTGTTGTAACCAGCTGTTTACC
AGCCAAGAAAGTAAATCTTTTGTGAAAAATAATGCCTGATTCTTCTACTT
GCAATGACGTTGTTTCAGCAACGGAACAGGGAAACAATGTGAATATGGTC
TACAATTCCTTCTGGGTGCTATCTCCTACTGTTGATCGAGATGCCTGGAA
GTATTGTCTCTGCAGATCTCGAAGCTTGTCCACCAGTTCCTGGAATGATG
GCCTGCACTGTGGATCACTGTGCCAGCAGCTCTCAACTATAGCAGCCCAC
CGTGGATCCACATCTTTTGGGATCTCTAAGCGTTGGTTCATGAACCCTAC
AGCTCCAATCACCTGCATTGAGTTGAGATTATCCCAAGGGATCTTCTCAG
TGGCGAGCTCCCATAATATAACTCCAAAGCTGTATACATCAGACTTCTCA
TCGGAGGGTTCATTTCGGAGAACTTCCGGTGCCATCCATTGAGGAGTTCC
CTTCCCAGTCTTGGTGGTGAGATATGTCTCATGCTTCAGACGTGACAGAC
CAAAATCACCAACCTTGACAGTCCAGTGTTTATCAACTAGAAGATTTGAA
GACTTCAAATCGCGATGAATGATTGGTGGGTTGCAATGATGAAGATAACT
CACGCCACGTGCTATATCCAAAGCCAT
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