DN621270

Overview
NameDN621270
Unique NameDN621270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN621270 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.154e-20
Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 1 
Query:  244 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELTKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMV 492
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY + KN P++++ IIE SV+PGGG+WL GQLFSAMV
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMV 117
The following BLAST results are available for this feature:
BLAST of DN621270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THI4_YEAST3.154e-2058.33Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621270 ID=DN621270; Name=DN621270; organism=Citrus sinensis; type=EST; length=585bp
TGCTAATCAAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAGG
AGGGGTAAAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTC
CTTCAGTTTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGG
GCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCG
TCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGA
ACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATG
ACGCGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGT
AGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCACCA
AAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGC
GGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTGTGTGCGCA
AACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAA
GACAGCTATATTGTGATCAAGCATGCATCGCTGTT
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