DN621264

Overview
NameDN621264
Unique NameDN621264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.131e-54
Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            W    ATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY++ C +DP+WCLPG+I +TATNFCPP+   S   G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +N
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKN 226          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.477e-54
Identity = 97/179 (54.19%), Postives = 123/179 (68.72%), Query Frame = 1
Query:  139 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRN 666
            G W+  HATFY              Y +   +GYG  T A+ST LF  G  CG+CYE+KC + P  C  G+  ++VTATN CPPN   SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+++NVGGAGDV  +S+KG+K   W  + RN
Sbjct:   40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRN 218          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.250e-53
Identity = 96/177 (54.24%), Postives = 122/177 (68.93%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDP--KWCLP-GSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            W    ATFY              YGNLY QGYG   AALSTALFN+G +CG CY + C+ D   +WC P G++ VTATN CPPN AL +D GGWCNPP +HFDM++PA+ +I  YRAGIVP+ +RR+ C ++GG+RFTV G  +F LVL+ NV G+G V +VS++G+ TGW  MSRN
Sbjct:   27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRN 203          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.102e-53
Identity = 88/176 (50.00%), Postives = 121/176 (68.75%), Query Frame = 1
Query:  139 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            G W+  HATFY              YGNL++ GYG +TAALST LFN+G  CG C+++ C   P      S +VTATN CPPN    ++ GGWCNPP  HFDMA+PAF+++A +RAGI+P+++RR+PC + GG+RF   G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS N
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHN 210          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 8.102e-53
Identity = 98/177 (55.37%), Postives = 120/177 (67.80%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            W    ATFY              YGNLY QGYG + AALS ALFN+G SCG CY + C+    P+WC  G+ + VTATN CPPN AL +D GGWCNPP  HFDM++PA+ QI  Y+AGIVP+ ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S  IKG+ TGW  MSRN
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRN 204          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.606e-51
Identity = 90/179 (50.28%), Postives = 121/179 (67.60%), Query Frame = 1
Query:  136 GGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            G  W++  ATFY              YGN+Y  GYG  T ALSTALFN G +CG C+++KC + P  C  GS   +VTATN CPPN   +++NGGWCNPP  HFD+ +PAF++IA ++AGI+P+S+RR+ C K GGIRF   G+ Y+ LV + NVGG GD+ ++++KGS+TGW  MS N
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHN 205          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.404e-51
Identity = 94/182 (51.65%), Postives = 122/182 (67.03%), Query Frame = 1
Query:  127 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            G+    W S  ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C+ +  +WC  G S+ VTATN+CPPN + S D GGWCNPP +HFDM++PA+  IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVL+TNV G+G V +  +KGS T W +MSRN
Sbjct:   21 GEAAQQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRN 202          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.065e-48
Identity = 95/178 (53.37%), Postives = 114/178 (64.04%), Query Frame = 1
Query:  142 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            GW  G ATFY              YGNLY QGYG N AALST LFNNG SCG CY + C  D  P  C  G+ I VT TNFCPPN  L    GGWCN    HFDM++PA+  I  Y AGIVPI ++++ C + GG+RFT+ G +YF LVL+TN+ G+G + S+S+KGS TGW  MSRN
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRN 197          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.748e-47
Identity = 91/177 (51.41%), Postives = 115/177 (64.97%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666
            W  G ATFY              YGNLY QGYG N AALST LFN+G SCG CY + C+    P WC  G +I VT TN+CPPN  L    GGWCN    HFDM++PA+  I  Y AGI+PI ++++ C + GG+RFT+NG +YF LVL+TN+ G+G + S+S+KGS TGW  M+RN
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRN 197          
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.895e-47
Identity = 91/179 (50.84%), Postives = 115/179 (64.25%), Query Frame = 1
Query:  145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGG--WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRN 666
            W   HATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+M+C      C  GS  I VTATN CPPN A   D GG  WCNPP  HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L  + NV GAGDV  + +K G   GW  MS N
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHN 214          
The following BLAST results are available for this feature:
BLAST of DN621264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
EXP25_ARATH1.131e-5452.87Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP32_ORYSJ1.477e-5454.19Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ1.250e-5354.24Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXPA7_ARATH8.102e-5350.00Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP31_ORYSJ8.102e-5355.37Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ARATH2.606e-5150.28Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXPA9_ORYSJ3.404e-5151.65Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP18_ORYSJ2.065e-4853.37Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ1.748e-4751.41Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP30_ORYSJ3.895e-4750.84Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621264 ID=DN621264; Name=DN621264; organism=Citrus sinensis; type=EST; length=666bp
CTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAGCAGTAGCAGC
CATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTTTTGTTTGTGC
TCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGGTGGGTGGCAA
AGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCGGCACAATGGG
TGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTATGGGACTAACA
CTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAGCTGTGGTTCA
TGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCCTCCCCGGCTC
CATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTTGCCCTGTCTA
ACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTTTGACATGGCT
GAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTATCGTCCCAAT
TTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATAAGGTTTACCG
TCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAATGTCGGAGGA
GCAGGAGATGTACATTCAGTATCAATCAAGGGTTCAAAGACTGGATGGCA
AGCAATGTCAAGGAAC
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