DN621264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.494e-14 Identity = 53/191 (27.75%), Postives = 85/191 (44.50%), Query Frame = 1 Query: 142 GWQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRN 666 GW G AT+Y Y G++ + + AA S +++ +G CGSCY++KC +P C + V T+ CP GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VL+ + G GD+ +V + G W AM ++ Sbjct: 37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQS 217
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 54/188 (28.72%), Postives = 86/188 (45.74%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSI--KGSKTGWQAMSRN 666 W +G AT+Y Y G ++ + + AA S +++ +GL CGSCY++KC + C + V T+ CP GG C HFD++ AF +A Q R AG++ I + R+PC GG++ T V + + VL+ G GD+ V + G+ W M ++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQS 213
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.398e-12 Identity = 54/186 (29.03%), Postives = 82/186 (44.09%), Query Frame = 1 Query: 142 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 666 GW + AT+Y Y Q + + AA S +L+ G CG+CYE+KC + C V T+ CP GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VLI G GD+++V + + GW M +N Sbjct: 63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQN 238
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 54/187 (28.88%), Postives = 83/187 (44.39%), Query Frame = 1 Query: 118 GTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWC-LPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTV--NGHSYFNLVLITNVGGAGDVHSVSIKGSK 639 G+ G GGGW + AT+Y G N+ + T+ + LF +G CGSCY+++C P LP ++I+T N+ P + L HFD++ AF +A+ AGI+ I FRR+PC G + F V + + +L+ G GDV V + S+ Sbjct: 83 GSSGGGGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVS--------------LYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESR 255
BLAST of DN621264 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.019e-11 Identity = 55/189 (29.10%), Postives = 84/189 (44.44%), Query Frame = 1 Query: 145 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIA------QYR-AGIVPISFRRIPCAKKGGIRFTV-----NGHSYFNLVLITNVGGAGDVHSVSI--KGSKTGWQAMSRN 666 W +G AT+Y Y Q + + AA S +++ +GL CGSCY++KC + C + V T+ CP GG C HFD++ AF +A Q R AG++ I + R+PC GG+ T + SYF VL+ G GD+ + + G+ W M ++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQS 213 The following BLAST results are available for this feature:
BLAST of DN621264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621264 ID=DN621264; Name=DN621264; organism=Citrus sinensis; type=EST; length=666bpback to top |