DN621263

Overview
NameDN621263
Unique NameDN621263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.819e-43
Identity = 75/127 (59.06%), Postives = 100/127 (78.74%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            DNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+++NVGGAGDV  +S+KG+K   W  + RNWGQ WQ++  L G+SL+F++   D R  TS +V+P +W
Sbjct:  130 DNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 8.819e-43
Identity = 75/127 (59.06%), Postives = 94/127 (74.02%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            DNGGWCNPP  HFDMA+PA+ +I  YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TNV   G + S+ + GS  T W  M RNWG NW S SYL GQ LSF++T  DG+T+   N+VP  W
Sbjct:  141 DNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 9.751e-42
Identity = 72/127 (56.69%), Postives = 96/127 (75.59%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            D+GGWCNPP  HFDMA+PA+ +I  YR GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+  W AM+ NWG  W S +YL GQ LSF++T +DG+T+   NVV   W
Sbjct:  123 DSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.274e-41
Identity = 73/126 (57.94%), Postives = 95/126 (75.40%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            D GGWCNPP +HFDM++PA+  IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVL+TNV G+G V +  +KGS T W +MSRNWG+NWQSN+YL GQ+LSF++ A DG  VT+ +V P NW
Sbjct:  115 DAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.274e-41
Identity = 72/127 (56.69%), Postives = 93/127 (73.23%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            DNGGWCNPP  HFDMA+PA+ +I  Y AGI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNV  AG + S+ + GS T  W  M+RNWG  W S +YL GQ LSF++T +D +T+   NVVP  W
Sbjct:  128 DNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.663e-41
Identity = 73/126 (57.94%), Postives = 101/126 (80.16%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            D+GGWCNPP  HFDM++PA+  I  YRAGIVP+ ++++ C ++GG+RFTV+G +YF LVLITNV G+G V ++S+KGSKTGW  ++RNWG NWQ NS L GQ+LSF++T++ G+T+  N+VVP  W
Sbjct:  116 DDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.839e-40
Identity = 71/126 (56.35%), Postives = 98/126 (77.78%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            ++GGWCNPP  HFDMAEPA+LQI  Y+AGI+P+ ++++ C ++GGIRFT+ G ++F LVL++NV G+G V SVS+KG  TGW  ++RNWG NWQ NS L GQ+LSF +T++ G+T+   NVVP  W
Sbjct:  116 NSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.127e-40
Identity = 68/124 (54.84%), Postives = 91/124 (73.39%), Query Frame = -3
Query:  346 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 717
            G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQNW +   L GQ +SF++T SDG T   NNV+P NW
Sbjct:  141 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.127e-40
Identity = 68/124 (54.84%), Postives = 91/124 (73.39%), Query Frame = -3
Query:  346 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 717
            G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F   G+ YF ++L  NVGGAGD+  + +KG KTGW  M +NWGQNW +   L GQ +SF++T SDG T   NNV+P NW
Sbjct:  134 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 257          
BLAST of DN621263 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.127e-40
Identity = 70/126 (55.56%), Postives = 97/126 (76.98%), Query Frame = -3
Query:  346 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 723
            ++GGWCNPP  HFDMAEPA+LQI  Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVLI+NV G+G + SV +KG  T    +SRNWG NWQS++ L GQ+L+F +T++ G+T+   N+VP  W
Sbjct:  121 NDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246          
The following BLAST results are available for this feature:
BLAST of DN621263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
EXP32_ORYSJ8.819e-4359.06Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ORYSJ8.819e-4359.06Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ORYSJ9.751e-4256.69Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA9_ORYSJ1.274e-4157.94Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP23_ORYSJ1.274e-4156.69Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP28_ORYSJ1.663e-4157.94Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP25_ORYSJ1.839e-4056.35Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP25_ARATH9.127e-4054.84Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH9.127e-4054.84Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP15_ORYSJ9.127e-4055.56Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621263 ID=DN621263; Name=DN621263; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTACACATTAAGATTGAAATTTTTTTTATCAATAAACTTTTAA
CTGATGTCTCAAATGATAACCAGAAATCACAACGCTGAATGAAATTATAC
CCGTTCATTCAATTGAAGTAATAACTATATATAGAACACAATCATTTCTA
TTTATAGAGGCCTAGCGGGTGCCAACAGACCACCACAGCAACAAGACAGG
CCACATCGGCCAGGCCTGAGCCTCACCTACCCCTATTCTCACCCTTCCTC
CCTCACAAACAGTGCCAAATTCAATTAAATATACAAATTCTGATTCACTT
TTTTAAAATCTAAAACTGACCACCCTCAAAGGTTTGCCCAAATTGCCAAT
TTCCAGGCACAACATTGTTGCTAGTCACAGTCCTGCCGTCACTGGCTGTC
AATTGGAAAGAAAGACTTTGGCCGTTAAGATAAGAATTGCTCTGCCAATT
TTGGCCCCAGTTCCTTGACATTGCTTGCCATCCAGTCTTTGAACCCTTGA
TTGATACTGAATGTACATCTCCTGCTCCTCCGACATTTGTGATCAAAACC
AGGTTGAAGTATGAGTGTCCATTGACGGTAAACCTTATTCCTCCTTTCTT
CGCACACGGGATCCTTCTGAAGGAAATTGGGACGATACCGGCGCGGTATT
GGGCAATTTGCAAGAAAGCGGGCTCAGCCATGTCAAAGTGCTGGAGGGGA
GGATTGCACCAACCGCCGTTGTCGT
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