DN621259
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSB3_DROME (Proteasome subunit beta type-3 OS=Drosophila melanogaster GN=Prosbeta3 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.957e-46 Identity = 85/158 (53.80%), Postives = 116/158 (73.42%), Query Frame = -3 Query: 248 RLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 718 R+F+GL+GL TD T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PFIC MD IG DFVVAGT E LYG CE ++KPD+EPD+LFE ++Q+++++ DRD +SGWG VYI+ +I ER LK RMD Sbjct: 48 RMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKITERTLKTRMD 205
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSB3_BOVIN (Proteasome subunit beta type-3 OS=Bos taurus GN=PSMB3 PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 6.474e-46 Identity = 90/159 (56.60%), Postives = 121/159 (76.10%), Query Frame = -3 Query: 248 DRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 721 DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G V+I+ +I R LK RMD Sbjct: 47 DRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSB3_YEAST (Proteasome component PUP3 OS=Saccharomyces cerevisiae GN=PUP3 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44 Identity = 83/157 (52.87%), Postives = 119/157 (75.80%), Query Frame = -3 Query: 248 LFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 715 +F+G++GLATD TL + ++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG++ + KPFI D IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG VYI+ E+ +R LK R D Sbjct: 49 VFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSB3_CAEEL (Proteasome subunit beta type-3 OS=Caenorhabditis elegans GN=pbs-3 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.397e-40 Identity = 70/158 (44.30%), Postives = 111/158 (70.25%), Query Frame = -3 Query: 248 DRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 721 D++++GL+G +D++T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+IC MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD SGWG VY +T ++ +K RMD Sbjct: 47 DKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTITKDKVNVSTIKARMD 204
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSB3_TRYBB (Proteasome subunit beta type-3 OS=Trypanosoma brucei brucei GN=PSB3 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38 Identity = 78/159 (49.06%), Postives = 114/159 (71.70%), Query Frame = -3 Query: 248 DRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 721 D + +GL+GL TD QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + ++C D IGA +D+V AGT ESL+G CEA+++P +EP+ELFE +QA+LS+ DRD LSG+G IVT ++ R++KGR D Sbjct: 47 DGIVMGLTGLRTDQQTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGYGAVAAIVTKDKLVTRLIKGRKD 205
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSB3_GIALA (Proteasome subunit beta type-3 OS=Giardia lamblia GN=PRSBETA3 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.883e-31 Identity = 59/139 (42.45%), Postives = 90/139 (64.75%), Query Frame = -3 Query: 293 IGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIV 709 +GL+GL TD T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++ MD+IG + +F +AGTA + L G CE KPDM DE+ + Q + S+ +RD SGWG HV ++ Sbjct: 53 LGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVL 191
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14 Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = -3 Query: 281 DRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 721 DR+ + +G D+Q L + + LY++R ER A+L S LL R+ PY Q +I G+ E K I ++D IG KD V G+ + YG E F P++ DE E +A+ S++ RD SG G V +T E Sbjct: 50 DRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDE 195
BLAST of DN621259 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 42/149 (28.19%), Postives = 76/149 (51.01%), Query Frame = -3 Query: 275 DRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIK 721 D + + ++G D+Q + + L+ KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G K F G+ YG EA + DM +E + AL S+++RD SG G + ++T +K Sbjct: 45 DYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193 The following BLAST results are available for this feature:
BLAST of DN621259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621259 ID=DN621259; Name=DN621259; organism=Citrus sinensis; type=EST; length=723bpback to top |