DN621256
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621256 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12 Identity = 56/243 (23.05%), Postives = 112/243 (46.09%), Query Frame = 3 Query: 3 RYGDIFKTHILGCPCVMISSPEAAKIVLVSKAHLFKPTYPPSKEKMIGPEALFFHQGAYHSRLKKLVQASFLPSAIRGSVSEIEQIVLKFLPTWKNATINTL---QEMKKYAFDVAMISAFGYQ-----HDLEMEGIKNLYQCIEKGYNSMPLDLPGTPYHKAIKAREQLNETLRRLIQK--RRESGKQIDG----LLGVLLAAKDQKLNQLSDSQIADNIIGVIFAAHDTTASVLTWVLKYL 689 +YG I+KTH+ G P V + + + +L+ + L +P S ++G L + H + KK++ +F A++ V I + V L W + L E+K+ F +AM G + + + + ++ + + S+P+D+P + ++ +KAR ++ + I+ RR + DG L +L+ ++ +L + + ++F H+TTAS T ++ YL Sbjct: 74 KYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGAGCLSNLHDSSHKQRKKVIMQAFSREALQCYVLVIAEEVSSCLEQWLSCGERGLLVYPEVKRLMFRIAMRILLGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVPFSGLYRGVKARNLIHARIEENIRAKIRRLQATEPDGGCKDALQLLIEHSWERGERLDMQALKQSSTELLFGGHETTASAATSLITYL 316
BLAST of DN621256 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 56/234 (23.93%), Postives = 106/234 (45.30%), Query Frame = 3 Query: 3 RYGDIFKTHILGCPCVMIS-SPEAAKIVLVSKAHLFKPTYPPSKEKMIGPEALFFHQGAYHSRLK-KLVQASFLPSAIRGSVSEIEQIVLKFLPTWK-NATINTLQEMKKYAFDVAMISAFGYQHDLEMEGIKNLYQCIEKGYNSMPLDLPGTPYHKAIKAREQLNETLRRLIQKRRESGKQIDGLLGVLLAAKDQKLNQLSDSQIADNIIGVIFAAHDTTASVLTWVLKYLHD 695 RYG+IF++++ G +++S PE K VL + F+ YP +IG L G +L V + +I+ ++ L W+ I+ +E + ++ + E I + + ++P+ +PGT Y + KARE L + + I+ RR+ + + L L +D S+ IAD I+ ++FA H+T++ +++ +K+L D Sbjct: 80 RYGEIFRSNLFGRSRIVVSVDPEFNKHVLQHEGRQFQANYPKPLRNLIGKYGLLSVHGDLQRKLHGAAVNLLRFERLSVDFMEDIQNLLHITLAKWEAKRDIHLQEECHQLVLNLMAKQLLDLSPSKDTEEICEAFGHFSEALLAVPIKIPGTKYARGFKAREFLIKKIYESIEDRRQHPEAVHNDLLTKLLKEDS----FSEEIIADFILFLLFAGHETSSRSMSFAIKFLTD 309
BLAST of DN621256 vs. ExPASy Swiss-Prot
Match: C524A_DICDI (Probable cytochrome P450 524A1 OS=Dictyostelium discoideum GN=cyp524a1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 62/248 (25.00%), Postives = 114/248 (45.97%), Query Frame = 3 Query: 3 RYGDIFKTHILGCPCVMISSPEAAKIVLVSKAHLFKPTYPPSKEKMIGPEALFFHQGAYHSRLKKLVQASFLPSAIRGSVSEIEQIVLKFLPTW-KN--ATINTLQEMK--KYAFDVAMISAFGYQHDLEMEGIKNLYQCIEKGYNSMPLDLPGTPYHKAIKAREQLNETLRRLIQKRRE---SGKQIDGLLGV----LLAAKDQKLNQLSDSQIADNIIGVIFAAHDTTASVLTWVLKYLHDNQDLL 710 +YG I T I+ + ++ E + V K K +K++ +A+ F +GA H +L+K + F A+ + E IV + + W KN A IN + A + + + KN + + +G+ +P+DLPGT KAI AR +L E +I K R+ G++ L+ + L +++ ++LS+ I ++ +FA+ D S L W ++ + ++ D+L Sbjct: 118 KYGPISWTSIMNKFVLFVTDAEINRQVF--KEENAKLYLSLGAKKILTEKAIPFIEGAPHRQLRKQLLPLFTIRALSSYLPIQESIVDEHIAMWIKNGKADINARNNCRDLNMAISTGVFVGNNTPESVRDDIAKNFF-VMNEGFLCLPIDLPGTTLRKAINARVRLVEIFTDIIAKSRKRMGDGEKPQSLIDLWVEHFLNCPEEERDELSNDTIIFTLLSFMFASQDALTSSLVWTVQLMAEHPDIL 362 The following BLAST results are available for this feature:
BLAST of DN621256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621256 ID=DN621256; Name=DN621256; organism=Citrus sinensis; type=EST; length=717bpback to top |