DN621254

Overview
NameDN621254
Unique NameDN621254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621254_ssr43 microsatellite DN621254_ssr43:43..64. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr30 microsatellite DN621254_ssr30:30..45. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr46 microsatellite DN621254_ssr46:46..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:44..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.103e-69
Identity = 133/189 (70.37%), Postives = 157/189 (83.07%), Query Frame = 2
Query:  107 PDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVV---GSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            P   TRE+ VY AKLAEQAERYEEMVE+M+++     G++   ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEEGR N+ H + ++ YR K+E EL+ +C  IL LL+++L+PSA A+ESKVFYLKMKGDYHRY+AEFK GDERK AAE TM +YKAAQDIA ADLAPTHPIRLGLAL FSVFY
Sbjct:    3 PAEPTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFY 191          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.103e-69
Identity = 131/191 (68.59%), Postives = 157/191 (82.20%), Query Frame = 2
Query:   92 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            MA     +  RE++VYLAKLAEQAERYEEMVEFM+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R N++HV+ +++YRSK+E ELS +C  IL+LL+  L+P++   +SKVFYLKMKGDYHRY+AEFK G ERK AAE T+ +YKAAQDIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    1 MAAPPASSSAREEFVYLAKLAEQAERYEEMVEFMEK-VAEAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFY 190          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.103e-69
Identity = 133/183 (72.68%), Postives = 159/183 (86.89%), Query Frame = 2
Query:  116 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            L+RE+ VY+AKLAEQAERYEEMVEFM+K V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+ V+L+K+YR K+E EL+ +C  IL+LLE++L+PS+TA ESKVFYLKMKGDY+RY+AEFK G ERK AAE+TM +YKAAQDIA A+L PTHPIRLGLAL FSVFY
Sbjct:    7 LSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFY 188          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 2.746e-69
Identity = 131/182 (71.98%), Postives = 156/182 (85.71%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            TRE+ VY+AKLAEQAERYEEMVEFM+K V  +    EL+VEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE + NE+HV+++K+YR K+E ELS +C  IL +LEA+LIPSA+ +ESKVFYLKMKGDYHRY+AEFK G ERK AAE T+ +YK+A DIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    3 TREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFY 183          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.685e-69
Identity = 132/186 (70.97%), Postives = 160/186 (86.02%), Query Frame = 2
Query:  107 PDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            P  L+RE+ VY+AKLAEQAERYEEMVEFM+K V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+ V+L+K+YR K+E EL+ +C  IL+LL+++L+PS+TA ESKVFYLKMKGDY+RY+AEFK G ERK AAE+TM +YKAAQ+IA A+L PTHPIRLGLAL FSVFY
Sbjct:    4 PAELSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFY 188          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.118e-69
Identity = 132/182 (72.53%), Postives = 157/182 (86.26%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            TRE+ VY+AKLAEQAERYEEMVEFM+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE +V+ +KEYR+++E ELS +C  IL+LL+++L+PSATA+ESKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YK+AQDIA ADL  THPIRLGLAL FSVFY
Sbjct:    7 TREENVYMAKLAEQAERYEEMVEFMEK-VAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFY 187          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.118e-69
Identity = 135/191 (70.68%), Postives = 158/191 (82.72%), Query Frame = 2
Query:   92 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            MA   P    RE+ VY+AKLA++AE  EEMVEFM+K V  S  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NEEHV+ ++EYRSK+E ELS +C  IL+LL++ LIPSAT+ +SKVFYLKMKGDYHRY+AEFK G ERK AAE T+ +YKAAQDIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    1 MAVVAPT--AREENVYMAKLADRAESDEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDSKLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIASAELAPTHPIRLGLALNFSVFY 188          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.180e-68
Identity = 133/183 (72.68%), Postives = 155/183 (84.70%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIG-DERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +RE+ VY+AKLAEQAERYEEMVEFM+K  V      ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HVS +KEYR K+E ELS +C  IL LLE++L+PSA+ +ESKVFYLKMKGDYHRY+AEFK G  ERK AAE+T+ +YK+AQDIA A+L PTHPIRLGLAL FSVFY
Sbjct:    4 SREENVYMAKLAEQAERYEEMVEFMEK--VAKVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFY 184          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 9.768e-67
Identity = 127/181 (70.17%), Postives = 152/181 (83.98%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VYLAKLAEQAERYEEMVEFM+K+V       ELT+EERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +K YRSK+E EL+ +C  IL+LL++ LI +A   +SKVFYLKMKGDY+RY+AEFK G ERK AAE+T+ +YK+AQDIA  +LAPTHPIRLGLAL FSVFY
Sbjct:    5 REENVYLAKLAEQAERYEEMVEFMEKVVGAGDD--ELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKTYRSKIESELTSICNGILKLLDSKLIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFY 183          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.332e-66
Identity = 124/181 (68.51%), Postives = 153/181 (84.53%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VY+A +A++AERYEEMVEFM+K VV +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +K+YRS++E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDY+RY+AEFK G ERK AAE+T+ +YK+AQDIA  +LAPTHPIRLGLAL FSVFY
Sbjct:    5 REENVYMANVADEAERYEEMVEFMEK-VVAALNGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFY 184          
The following BLAST results are available for this feature:
BLAST of DN621254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14334_ORYSJ2.103e-6970.3714-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
14334_ARATH2.103e-6968.5914-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14332_ORYSJ2.103e-6972.6814-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14333_ARATH2.746e-6971.9814-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
1433B_HORVU4.685e-6970.9714-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
1433A_HORVU6.118e-6972.5314-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14333_SOLLC6.118e-6970.6814-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]
14331_SOLTU5.180e-6872.6814-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
1433A_TOBAC9.768e-6770.1714-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
14335_SOLLC6.332e-6668.5114-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621254 ID=DN621254; Name=DN621254; organism=Citrus sinensis; type=EST; length=665bp
CTGAATTTTCACAAATCGCAACGCAAGCCGTCTGTCTGTCTGTCTCTCTC
TCTCTCTCTCTCTCATCACACTTTCAGAGCCTGTGAAAAAGATGGCGACA
ACAGTTCCGGACAACCTGACGAGAGAGCAGTACGTGTACTTAGCCAAGCT
AGCCGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGCAGAAGC
TGGTTGTCGGCTCGACTCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAAC
CTCCTCTCAGTGGCCTACAAGAACGTAATCGGCTCACTCCGCGCCGCGTG
GCGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGG
AACACGTGTCGCTCGTGAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTT
TCGGATGTGTGCGCGAGTATTTTGAGGTTGTTGGAAGCGAATTTGATTCC
GTCGGCTACGGCGAGTGAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAG
ATTATCATCGTTACATGGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCC
GCCGCTGAAGACACTATGCAATCTTACAAAGCTGCTCAGGATATTGCTGG
GGCTGATCTCGCGCCGACGCATCCGATAAGGCTGGGATTGGCTCTCATTT
TCTCGGTGTTTTACT
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