DN621254

Overview
NameDN621254
Unique NameDN621254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621254_ssr43 microsatellite DN621254_ssr43:43..64. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr30 microsatellite DN621254_ssr30:30..45. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr46 microsatellite DN621254_ssr46:46..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:44..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.332e-66
Identity = 127/184 (69.02%), Postives = 152/184 (82.61%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAA--ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            TRE+ VY+AKLAEQAERYEEMVEFM+K+V  +      ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEEGR    H +  + YR++VE ELS++CA ILRLL+  L+P+A A ++KVFYLKMKGDYHRY+AEFK G ERK AA+ T+ +Y+AAQDIA  +L+PTHPIRLGLAL FSVFY
Sbjct:    9 TREEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFY 192          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.142e-65
Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VY+AKLAEQAERY+EMVE M+K V       EL+VEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE + NEEHV  +++YR+ VE+ELS +CASIL+LL+ +LIP+A+  ESKVFYLKMKGDYHRY+AEFK G +RK AAE T+ +YKAAQDIA  DL PTHPIRLGLAL FSVFY
Sbjct:    5 REECVYMAKLAEQAERYDEMVEEMKK-VAKLVHDQELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFY 184          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.360e-65
Identity = 123/181 (67.96%), Postives = 151/181 (83.43%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VY+A +A +AERYEEMVEFM+K+V       ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +K+YRS++E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDY+RY+AEFK G ERK AAE+T+ +YK+AQDIA  +LAPTHPIRLGLAL FSVFY
Sbjct:    5 REENVYMANVAARAERYEEMVEFMEKVVAALD--TELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFY 183          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.490e-62
Identity = 122/183 (66.67%), Postives = 148/183 (80.87%), Query Frame = 2
Query:  116 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +TRE+ VY+AKLAEQAERYEEMVE M+K+   +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE + NE HV  +KEY+ KVEKEL+D+C  IL +LE++LI S+ + ESKVFY KMKGDY RY+AEF  G+ RK +AE ++ +YKAA DIA  +L PTHPIRLGLAL FSVFY
Sbjct:    1 MTREENVYMAKLAEQAERYEEMVEAMKKV---AELDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNENHVKKIKEYKCKVEKELTDICNDILEVLESHLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFY 180          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.614e-61
Identity = 121/181 (66.85%), Postives = 146/181 (80.66%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE  VY AKLAEQAERY+EMVE M+K+   ++   ELTVEERNLLSVAYKNVIG+ RA+WRI++SIEQKEE +  EE + ++K YR +VEKEL D+C+ IL +LE +LIP AT+ ESKVFY KMKGDYHRY+AEF  G +RK AAE+++ +YKAA DIA  DL PTHPIRLGLAL FSVFY
Sbjct:    4 RENNVYKAKLAEQAERYDEMVEAMKKV---ASMDVELTVEERNLLSVAYKNVIGARRASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDILNVLEKHLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFY 181          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.010e-61
Identity = 121/182 (66.48%), Postives = 148/182 (81.32%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +RE  VYLAKLAEQAERYE MVE M+   V ST   ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEE + N   V L+KEYR K+E+EL  +C  IL +LE +LIP+A ++ESKVFY KMKGDY+RY+AEF +G++R+ +A+ +++ YKAA +IA A+LAPTHPIRLGLAL FSVFY
Sbjct:    5 SREDAVYLAKLAEQAERYEGMVENMKS--VASTDQ-ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFY 183          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.784e-60
Identity = 117/182 (64.29%), Postives = 146/182 (80.22%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +RE  VYLAKLAEQAERYEEMVE M+K+   +    +L+VEERNLLSVAYKN+IG+ RA+WRI+SSIEQKEE R N    +L+KEYR K+E ELSD+C  +L +LE +LIP+AT  ESKVFY KMKGDY+RY+AEF +G+  K AA+ ++++YKAA DIA A+L PT P+RLGLAL FSVFY
Sbjct:    4 SRENSVYLAKLAEQAERYEEMVENMKKVACSND---KLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFY 182          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.192e-60
Identity = 118/182 (64.84%), Postives = 146/182 (80.22%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +RE  VYLAKLAEQAERYEEMVE M+ +   ++   EL+VEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEE + NE  V+L+++YR+K+E ELS +C  IL +L  +LI SA   ESKVFY KMKGDYHRY+AEF I ++RK AA+ ++++YKAA D+A  +L PTHPIRLGLAL FSVFY
Sbjct:    4 SREDSVYLAKLAEQAERYEEMVENMKAV---ASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFY 182          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.856e-60
Identity = 116/180 (64.44%), Postives = 145/180 (80.56%), Query Frame = 2
Query:  125 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            E  VYLAKLAEQAERYEEMVE M+   + ++   +LTVEERNLLSVAYKNVIG+ RA+WRIV+SIEQKEE + N   V+L+KEYR K+E EL+ +C  IL +L+ +LIPSA + ESKVFY K+KGDYHRY+AEF IGD RK +A+ ++++YKAA ++A  +L PTHPIRLGLAL FSVFY
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMK---IVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFY 180          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.577e-59
Identity = 116/181 (64.09%), Postives = 145/181 (80.11%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE +VY+AKLAEQAERYEEMVE M+ +   +    ELTVEERNLLSV YKNVIG+ RA+WRI+SSIEQKEE + NE +   +KEYR KVE ELS++C  ++R+++ +LIPSA A ES VFY KMKGDY+RY+AEFK G+E+K AA+ +M++Y++A   A ADL PTHPIRLGLAL FSVFY
Sbjct:    7 RENFVYIAKLAEQAERYEEMVESMKNV---ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFY 184          
The following BLAST results are available for this feature:
BLAST of DN621254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14331_ORYSJ6.332e-6669.0214-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433_CHLRE3.142e-6570.7214-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
14332_SOLTU5.360e-6567.9614-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433_DICDI2.490e-6266.6714-3-3-like protein OS=Dictyostelium discoideum GN... [more]
1433E_DROME1.614e-6166.8514-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
RAD24_SCHPO8.010e-6166.48DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
RAD25_SCHPO1.784e-6064.29DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433_CANAL5.192e-6064.8414-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433_TRIHA8.856e-6064.4414-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433D_SOYBN2.577e-5964.0914-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621254 ID=DN621254; Name=DN621254; organism=Citrus sinensis; type=EST; length=665bp
CTGAATTTTCACAAATCGCAACGCAAGCCGTCTGTCTGTCTGTCTCTCTC
TCTCTCTCTCTCTCATCACACTTTCAGAGCCTGTGAAAAAGATGGCGACA
ACAGTTCCGGACAACCTGACGAGAGAGCAGTACGTGTACTTAGCCAAGCT
AGCCGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGCAGAAGC
TGGTTGTCGGCTCGACTCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAAC
CTCCTCTCAGTGGCCTACAAGAACGTAATCGGCTCACTCCGCGCCGCGTG
GCGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGG
AACACGTGTCGCTCGTGAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTT
TCGGATGTGTGCGCGAGTATTTTGAGGTTGTTGGAAGCGAATTTGATTCC
GTCGGCTACGGCGAGTGAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAG
ATTATCATCGTTACATGGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCC
GCCGCTGAAGACACTATGCAATCTTACAAAGCTGCTCAGGATATTGCTGG
GGCTGATCTCGCGCCGACGCATCCGATAAGGCTGGGATTGGCTCTCATTT
TCTCGGTGTTTTACT
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