DN621254

Overview
NameDN621254
Unique NameDN621254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN621254_ssr43 microsatellite DN621254_ssr43:43..64. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr30 microsatellite DN621254_ssr30:30..45. BLAST: Citrus ESTs to Prunus persica proteins V1
DN621254_ssr46 microsatellite DN621254_ssr46:46..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:44..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 6.346e-58
Identity = 113/181 (62.43%), Postives = 145/181 (80.11%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE +VY+AKLAEQAERY+EMVE M+ +   +    ELTVEERNLLSV YKNV+GS RA+WRI+SSIEQKEE R NE++V  +KEY  KVE EL+++C  I+ +++ +LIPS +A ES VFY KMKGDY+RY+AEFK G+++K  AE ++++Y+AA   A A+LAPTHPIRLGLAL FSVFY
Sbjct:    7 RENFVYVAKLAEQAERYDEMVEAMKNV---ANMDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEESRGNEQNVKRIKEYLQKVESELTNICNDIMVVIDQHLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFY 184          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.150e-57
Identity = 112/181 (61.88%), Postives = 143/181 (79.01%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE +VY+AKLAEQAERYEEMVE M+ +   +    ELTVEERNLLSV YKNV+G+ RA+WRI+SSIEQKEE + N+  V  +KEYR KVE ELS++C+ I+ +++  LIPS+++ E  VF+ KMKGDY+RY+AEFK GDERK AA+ +M++Y+ A   A A+LA THPIRLGLAL FSVFY
Sbjct:    7 RENFVYVAKLAEQAERYEEMVEAMKNV---ANLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFY 184          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.017e-57
Identity = 105/182 (57.69%), Postives = 147/182 (80.77%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +RE  VY AKLAEQ+ERY+EMV+ M+++   +   AEL++EERNLLSVAYKNVIG+ RA+WRI+SS+EQKE+ + N++HV ++K YR+K+EKELS  C  +L++++ NL+P A+ SESKVF+ KM+GDY+RY AEF + ++RK  A+ ++ +Y  A +I+ A+LAPTHPIRLGLAL FSVFY
Sbjct:    3 SREDCVYTAKLAEQSERYDEMVQCMKQV---AEMEAELSIEERNLLSVAYKNVIGAKRASWRIISSLEQKEQAKGNDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFY 181          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.197e-56
Identity = 111/181 (61.33%), Postives = 141/181 (77.90%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE +VY+AKL+EQAERY+EMVE M+K+   +   +ELTVEERNLLSV YKNVIG+ RA+WRI+SSIEQKEE + NE +V  +K YR KVE EL+++C  IL +++ +LIP AT+ E+ VFY KMKGDY+RY+AEFK   ERK AAE +++ Y+AA   A  +L  THPIRLGLAL FSVFY
Sbjct:   10 RETFVYMAKLSEQAERYDEMVETMKKV---ARVNSELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFY 187          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14333_ENTHI (14-3-3 protein 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.548e-56
Identity = 103/180 (57.22%), Postives = 147/180 (81.67%), Query Frame = 2
Query:  125 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            E  V+L+KLAEQ+ERY+EMV++M+++   +T   EL+VEERNLLSVAYKNVIGS RA+WRI++S+EQKE+ + N++HV ++K YR+K+E EL+  C  +L++++ NL+P+A+ SESKVFY KM+GDY+RY AEF + ++R+  A+ ++ +Y  A +I+ ADLAPTHPIRLGLAL FSVFY
Sbjct:    2 EDCVFLSKLAEQSERYDEMVQYMKQVAALNT---ELSVEERNLLSVAYKNVIGSRRASWRIITSLEQKEQAKGNDKHVEIIKGYRAKIEDELAKYCDDVLKVIKENLLPNASTSESKVFYKKMEGDYYRYYAEFTVDEKRQEVADKSLAAYTEATEISNADLAPTHPIRLGLALNFSVFY 178          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.758e-56
Identity = 109/182 (59.89%), Postives = 142/182 (78.02%), Query Frame = 2
Query:  119 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            +R+  VY+AKLAEQAER++EMV+ M+   V   P  EL+VEERNLLSVAYKNVIGS RA+WR++SSIE K+      + + L+++Y+SK+E EL+D+CA IL+++EA LIP++T+ E KVFY KMKGDYHRY+AEF+  DERK +A D + +Y+ A D A  DL PTHPIRLGLAL FSVFY
Sbjct:    3 SRDDLVYMAKLAEQAERFDEMVDHMK--AVAQQPK-ELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTV---SDQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFY 178          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.257e-55
Identity = 111/181 (61.33%), Postives = 141/181 (77.90%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE+ VYLAKL+EQ ERY+EMVE M+K+   +    ELTVEERNL+SV YKNVIG+ RA+WRI+SSIEQKEE + N+E+V  +K YR +VE EL+ VC  IL +++ +LIPS+ A ES VF+ KMKGDY+RY+AEF  G ERK AA+ ++++YKAA   A   LAPTHP+RLGLAL FSVFY
Sbjct:    5 REKQVYLAKLSEQTERYDEMVEAMKKV---AQLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFY 182          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.948e-55
Identity = 107/181 (59.12%), Postives = 142/181 (78.45%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RE  VY+A+LAEQAERY+EMV+ M+ +   +    ELTVEERNLLSV YKNV+GS RA+WRI+SSIEQKE+ R NE++V  ++ YR KVE EL+D+C +I+ +++ +LIPS TA ES VFY KMKGDY+RY+AEFK GD++K  ++ ++++Y+ A   A A+L  THPIRLGLAL FSVFY
Sbjct:    7 RESLVYIARLAEQAERYDEMVDAMKNV---ANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEDARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFY 184          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.567e-55
Identity = 101/140 (72.14%), Postives = 124/140 (88.57%), Query Frame = 2
Query:  245 RNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            RNLLSVAYKNV+G+ RA+WRI+SSIEQKEE R NE+HVS++++YRS++EKELSD C  IL+LL+  L+P+A++ +SKVFYLKMKGDYHRY+AEFK G +RK AAE T+ +YKAAQDIA A+LAPTHPIRLGLAL FSVFY
Sbjct:    1 RNLLSVAYKNVVGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSRIEKELSDNCDGILKLLDTKLVPAASSGDSKVFYLKMKGDYHRYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFY 140          
BLAST of DN621254 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 8.577e-55
Identity = 111/181 (61.33%), Postives = 140/181 (77.35%), Query Frame = 2
Query:  122 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALIFSVFY 664
            R+ +VYLAKL+EQAERYEEMVE M+ +   +    +LTVEERNLLSV YKNVIGS RA+WRI SSIEQKE  + N+ +V  +KEY  KVE ELS++C  I+ +L+ +LIPSA+  ES VF+ KMKGDY+RY+AEFK G+ERK AA+ ++++Y+ A   A A L PTHPIRLGLAL FSVFY
Sbjct:    7 RDTFVYLAKLSEQAERYEEMVESMKSVAKLNV---DLTVEERNLLSVGYKNVIGSRRASWRIFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFY 184          
The following BLAST results are available for this feature:
BLAST of DN621254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14339_SOLLC6.346e-5862.4314-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
1433C_SOYBN3.150e-5761.8814-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14331_ENTHI7.017e-5757.6914-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
14312_ARATH1.197e-5661.3314-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
14333_ENTHI4.548e-5657.2214-3-3 protein 3 (Fragment) OS=Entamoeba histolyti... [more]
1433_FUCVE7.758e-5659.8914-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
14310_ARATH2.257e-5561.3314-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
14338_SOLLC2.948e-5559.1214-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
1433_SPIOL6.567e-5572.1414-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
14339_ARATH8.577e-5561.3314-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621254 ID=DN621254; Name=DN621254; organism=Citrus sinensis; type=EST; length=665bp
CTGAATTTTCACAAATCGCAACGCAAGCCGTCTGTCTGTCTGTCTCTCTC
TCTCTCTCTCTCTCATCACACTTTCAGAGCCTGTGAAAAAGATGGCGACA
ACAGTTCCGGACAACCTGACGAGAGAGCAGTACGTGTACTTAGCCAAGCT
AGCCGAGCAAGCCGAGCGTTACGAAGAGATGGTGGAGTTCATGCAGAAGC
TGGTTGTCGGCTCGACTCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAAC
CTCCTCTCAGTGGCCTACAAGAACGTAATCGGCTCACTCCGCGCCGCGTG
GCGCATCGTGTCGTCGATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGG
AACACGTGTCGCTCGTGAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTT
TCGGATGTGTGCGCGAGTATTTTGAGGTTGTTGGAAGCGAATTTGATTCC
GTCGGCTACGGCGAGTGAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAG
ATTATCATCGTTACATGGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCC
GCCGCTGAAGACACTATGCAATCTTACAAAGCTGCTCAGGATATTGCTGG
GGCTGATCTCGCGCCGACGCATCCGATAAGGCTGGGATTGGCTCTCATTT
TCTCGGTGTTTTACT
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