DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12
Identity = 47/148 (31.76%), Postives = 73/148 (49.32%), Query Frame = -2
Query:  215 YMIMQCLGAICGAAVVKGFQKSQ--YEMLGGGANMLSKG------YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQ 634
            Y+I Q +G +    ++      Q  ++++G G      G      YS    L +EIV T + +  +  ATD KR  +       AP+ IG  + L+HL +IP+T T +NPARS   A+ Y  D A    W+FW  P +G  L A+ ++
Sbjct:   83 YIIAQVIGGLIAGGILYVIATGQAGFDVVGSGFAANGYGEHSPGQYSMLAALVSEIVMTMMFLIVIMGATD-KRAPQG-----FAPIAIGLCLTLIHLISIPVTNTSVNPARSTAVAM-YVGDWAVSQLWLFWVAPIVGGVLGAVIYK 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVVK-------GFQKSQYEMLGGGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 634
            Y+I Q +G I  AAV+        GF  +       G    S G +S    + AEIV T + +  +  ATD +        P  APL IG A+ L++L +IPIT T +NPARS   A I+    A +  W FW  P IG  +    ++++
Sbjct:   84 YIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARSTAVA-IFQNTWALEQLWFFWVMPIIGGIVGGGIYRLL 226          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = -2
Query:  218 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 658
            +++   VFY + Q LGA   A ++ GF      +          G S+ +G+  E+V TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+       +  +W++W GP +G  LA L +
Sbjct:   96 ITILTGVFYWVAQLLGATV-ACLLLGFVTHGKAI----PTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 48/148 (32.43%), Postives = 76/148 (51.35%), Query Frame = -2
Query:  218 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 658
            +++   + Y + Q LGA     +++     Q     G +     G S+ +G+  EIV TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+       +  +W++W GP +G  LA L +
Sbjct:   96 ITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGVS-----GISEIEGVVMEIVITFALVYTVYATAADPKKGSLGT----IAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  218 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 658
            +++   +FY + Q LGA     +++     +     G    +S G ++ +G+  EIV TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+       +  +W++W GP IG  LA L +
Sbjct:   96 ITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHG----VSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV---AAADFAGNWVYWVGPLIGGGLAGLVY 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12
Identity = 50/152 (32.89%), Postives = 68/152 (44.74%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLS---------KGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAA-LYHQIV 634
            Y+  Q LGAI  +  +    +        G+N L+         +GY     L  E V TF+ +  +   TD    A        AP  IG A+ L+HL +IPIT T +NPARS G AL           W+FW  P  GA LA  +YH ++
Sbjct:   91 YIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVL 236          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 47/148 (31.76%), Postives = 70/148 (47.30%), Query Frame = -2
Query:  218 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 661
            +++L R+  Y+  Q LG+     ++     +     G   + L  G     G+  E V TF L++ V++     R A     P+L  L +G  V    LA  P +G  +NPARS G AL+      W DHW++W GP IG  LA L +
Sbjct:   95 RITLFRSALYVAAQLLGSTLACLLLAFLAVADS---GVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVGANV----LAGGPFSGASMNPARSFGPALVAG---VWADHWVYWVGPLIGGPLAGLVY 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12
Identity = 50/151 (33.11%), Postives = 77/151 (50.99%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            ++L R + Y I Q LG+     +++         L  G   L+ G S  + L  EIV TF LVYTV++ A D K+ +  +    +AP+ IGF V    L      G  +NPA S G AL+     +W+  W++W GP IG  LA + ++++
Sbjct:   98 ITLFRGLLYWIAQLLGSTVACFLLRFSTGG----LATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGT----IAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = -2
Query:  215 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQ 658
            ++L R+  Y   Q LG+     ++      +  +     +  + G      +  E V TF L++ V++    +R A    V  L PL +G  V    LA  P +G  +NPARS G AL   +   W DHWI+W GP IG  LA L ++
Sbjct:   95 ITLFRSALYAAAQLLGSSLACLLLAALTGGEEAV---PVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA----VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGE---WADHWIYWVGPLIGGPLAGLVYE 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 49/143 (34.27%), Postives = 69/143 (48.25%), Query Frame = -2
Query:  224 YMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAAL 634
            Y+I Q  GAI  AA   V    K+  ++ G  +N   +    GYS    L  EI+ T   +  +  +T  +  A        AP+ IG A+ L+HL +IP+T T +NPARS G AL      A    W+FW  P +G A  A+
Sbjct:   84 YVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGAAGAV 219          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
AQPZ_VIBPA1.809e-1231.76Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQPZ_PHOLL1.809e-1233.33Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
TIP21_MAIZE2.363e-1233.78Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP23_MAIZE3.086e-1232.43Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP22_MAIZE3.086e-1233.11Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
AQPZ_SYNY33.086e-1232.89Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
TIP44_MAIZE4.031e-1231.76Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP11_ORYSJ5.264e-1233.11Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP43_ORYSJ8.980e-1231.08Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
AQPZ2_AGRT51.173e-1134.27Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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