DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = -2
Query:  224 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLS---KGYSKGDGLGAEIVGTFVLVYTV-FSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAAL 658
            L+L   + Y + Q LG + GAA+ K     +      GA  ++   +G   G  L AEI+ T +L   V   A + K          LAP  IGFAV +  LA  P++G  +NPAR+ G A++ N    W+ HWI+W GP +   L  L
Sbjct:  105 LNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAG-ALVAEIILTTLLALAVCMGAINEKTKGP------LAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH---WNFHWIYWLGPLLAGLLVGL 243          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11
Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = -2
Query:  182 QCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 622
            Q  GA+ GA  +     +QY  + GG ++    ++   G GAE+V TFV+   V          +    PI+    I      + L+    TG  +NPA + G A + N+   W+  +++W  PFIGA LAA   + +    P K K
Sbjct:  101 QAAGAVGGALAISELMPAQYRHMLGGPSLKVDPHT---GAGAELVLTFVITLAVLLII-----VKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAWIFRAMFLTPPPKPK 239          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 48/151 (31.79%), Postives = 73/151 (48.34%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            ++L R + Y + Q LG+     +++     Q     G       G S  + L  EIV TF LVYTV++ A D K+ +  +    +AP+ IGF V    L      G  +NPA S G AL+      W   W++W GP IG  LA + ++++
Sbjct:   98 ITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-----LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGT----IAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWEWGYQWVYWVGPLIGGGLAGVIYELL 236          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = -2
Query:  206 VFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAK--RNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 640
            V Y+I Q +G I  AA++      +       +   S GY +    G  ++   V V  V SA        A D   P   AP+ IG A+ L+HL +IP+T T +NPARS   A I+    A +  W FW  P +G  +  L ++ ++
Sbjct:   82 VGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVA-IFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = -2
Query:  206 VFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAK--RNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 640
            V Y+I Q +G I  AA++      +       +   S GY +    G  ++   V V  V SA        A D   P   AP+ IG A+ L+HL +IP+T T +NPARS   A I+    A +  W FW  P +G  +  L ++ ++
Sbjct:   82 VGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVA-IFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = -2
Query:  206 VFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAK--RNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 640
            V Y+I Q +G I  AA++      +       +   S GY +    G  ++   V V  V SA        A D   P   AP+ IG A+ L+HL +IP+T T +NPARS   A I+    A +  W FW  P +G  +  L ++ ++
Sbjct:   82 VGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVA-IFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = -2
Query:  206 VFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAK--RNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 640
            V Y+I Q +G I  AA++      +       +   S GY +    G  ++   V V  V SA        A D   P   AP+ IG A+ L+HL +IP+T T +NPARS   A I+    A +  W FW  P +G  +  L ++ ++
Sbjct:   82 VGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALV-VELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVA-IFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLL 227          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11
Identity = 46/148 (31.08%), Postives = 67/148 (45.27%), Query Frame = -2
Query:  215 RAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGG----ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQ 646
            RAV Y+  Q L +     +++         L GG     + L +G S   GL  E++ TF L++  ++     R    S V  + PL  G  V    LA    TG  +NPARS G AL       W +HW++W GP +G  LA   ++
Sbjct:  106 RAVLYVAAQLLASSAACVLLR--------FLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGPLLGGPLAGFVYE 238          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11
Identity = 44/145 (30.34%), Postives = 68/145 (46.90%), Query Frame = -2
Query:  206 YMIMQCLGAICGAAVVKGFQKSQ--YEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 634
            Y I Q  G + GAA+ K     +  +   G    ++ +     + LG EI+ T +LV  V           +  +  LAP  IGF+V +  LA   I+G  +NPAR+ G A++      WD HWI+W GP +      L  +++I
Sbjct:  113 YWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGA-----VNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLLAGLFVGLLIRLLI 249          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
AQP8_HUMAN2.000e-1134.23Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
SIP12_MAIZE2.613e-1129.25Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1[more]
TIP11_MAIZE4.457e-1131.79Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
AQPZ_SHIFL4.457e-1131.08Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI4.457e-1131.08Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL64.457e-1131.08Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO574.457e-1131.08Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
TIP41_MAIZE7.602e-1131.08Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
AQP8_MOUSE7.602e-1130.34Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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