DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.966e-68
Identity = 122/160 (76.25%), Postives = 134/160 (83.75%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RAV YM+ QCLGAICG   VK FQ S Y+  GGGAN L+ GY+ G GL AEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFW GPFIGAA+AA YHQ V+RA   KS
Sbjct:  116 RKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKS 275          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 3.966e-68
Identity = 117/160 (73.12%), Postives = 138/160 (86.25%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RA+ Y++ QCLGAICG  +VK FQ + ++  GGGAN L+ GYS+G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IYNKD+ WDDHWIFW GP +GAA+AA YHQ ++RA   K+
Sbjct:  123 RKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKA 282          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 6.765e-68
Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = -2
Query:  200 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 664
            RK+SL RA+ Y+I QCLGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+AWDD WIFW GP IGAA+AA YHQ V+RA
Sbjct:  122 RKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 6.765e-68
Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = -2
Query:  200 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 664
            RK+SL RA+ Y+I QCLGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+AWDD WIFW GP IGAA+AA YHQ V+RA
Sbjct:  123 RKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.154e-67
Identity = 119/155 (76.77%), Postives = 135/155 (87.10%), Query Frame = -2
Query:  200 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 664
            RK+SL RA+ YM  QCLGAICG A+VKGFQ S Y+  GGGAN L+ GYS G GL AEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A++YN ++AW D WIFW GPFIGAA+AALYHQ+++RA
Sbjct:  120 RKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 5.727e-67
Identity = 120/160 (75.00%), Postives = 136/160 (85.00%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK++L RAV YM+ QCLGAICG A+VK FQ + +   GGGAN LS GYS G G+ AEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+AWD HWIFW GPF GAA+AA YHQ V+RA   K+
Sbjct:  117 RKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKA 276          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.479e-67
Identity = 120/160 (75.00%), Postives = 132/160 (82.50%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RAV YM+ QCLGAICG   VK FQ S Y   GGGAN L+ GY+ G GL AEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK + WDDHWIFW GPFIGA +AA YHQ V+RA   KS
Sbjct:  116 RKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKS 275          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.479e-67
Identity = 121/160 (75.62%), Postives = 133/160 (83.12%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RA+ Y+I QCLGAICG   VK FQ S Y   GGGAN L+ GYS G GL AEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFW GPFIGAA+AA YHQ V+RA   KS
Sbjct:  118 RKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKS 277          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.666e-66
Identity = 118/160 (73.75%), Postives = 132/160 (82.50%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL R V Y++ QCLGAICG   VK FQ S Y   GGGAN L+ GY+KG GLGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++AWDD WIFW GP IGAA AA YHQ ++RA   K+
Sbjct:  118 RKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKA 277          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.842e-66
Identity = 115/160 (71.88%), Postives = 134/160 (83.75%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RA+ YMI QC GAICGA + KGFQKS Y   GGG N +S GY+KG  LGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS G A+I+N D+AWDD WI+W GPF+GAA+AA+YHQ ++R    K+
Sbjct:  120 RKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKA 279          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
PIP22_ARATH3.966e-6876.25Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_MAIZE3.966e-6873.13Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP24_MAIZE6.765e-6878.71Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE6.765e-6878.71Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_ORYSJ1.154e-6776.77Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP25_ARATH5.727e-6775.00Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH7.479e-6775.00Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP21_ARATH7.479e-6775.63Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP24_ARATH1.666e-6673.75Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_MAIZE2.842e-6671.88Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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