DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 3.712e-66
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+S+ RAV Y++ QCLG I G  +VKG  K QY   GGGANM++ GYS G  LGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+IYN+ +AWDDHWIFWAGPFIGA  AA YHQ ++RA   K+
Sbjct:  113 RKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKA 272          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.712e-66
Identity = 120/155 (77.42%), Postives = 132/155 (85.16%), Query Frame = -2
Query:  200 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 664
            RK+SL RA+ YM  Q LGAICG A+VKGFQ   Y   GGGAN +S GYS G GL AEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN  +AW D WIFW GPFIGAA+AALYHQIV+RA
Sbjct:  122 RKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.712e-66
Identity = 120/155 (77.42%), Postives = 133/155 (85.81%), Query Frame = -2
Query:  200 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 664
            RK+SL RAV Y++ Q LGAICG  +VKGFQ + Y   GGGAN LS GYSKG GL AEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+ +AW DHWIFW GP IGAA+AA YHQ V+RA
Sbjct:  123 RKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.332e-66
Identity = 116/160 (72.50%), Postives = 134/160 (83.75%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RAV YM+ QCLGAICG  +VK F  + Y+ LGGGAN ++ GYS G  LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++AWDDHWIFW GPF+GA  AA YHQ ++RA   K+
Sbjct:  109 RKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 268          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.332e-66
Identity = 114/160 (71.25%), Postives = 136/160 (85.00%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RA+ Y++ QCLGAICG  +VK FQ + +   GGGAN L+ GYSKG GL AEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I+N ++AW +HWIFW GPF+GAA+AA YHQ ++RA   K+
Sbjct:  123 RKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKA 282          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.842e-65
Identity = 116/160 (72.50%), Postives = 133/160 (83.12%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RA+ YMI QCLGAICG   VK F K+ Y  LGGGAN ++ GYSKG  LGAEI+GTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN ++AWDD WIFW GPF+GA  AA YHQ ++RA   K+
Sbjct:  111 RKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKA 270          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.842e-65
Identity = 116/159 (72.96%), Postives = 133/159 (83.65%), Query Frame = -2
Query:  185 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 661
            K+SL RAV YM+ QCLGA CG  +VK FQ + Y   GGGANMLS GY+ G G+GAEI+GTFVLVYTVFSATD KRNARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+IYN  +AWDD WIFW GPF+GAA+AA YHQ V+RA   K+
Sbjct:  118 KVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKA 276          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.000e-65
Identity = 115/160 (71.88%), Postives = 130/160 (81.25%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            RK+SL RA+ YMI QC GAICG  +VK F K  Y   GGGAN ++ GY+KG   GAE++GTFVLVYTVFSATD KR+ARDSHVPILAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFW GPF+GA  AA YHQ V+RA   K+
Sbjct:  113 RKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKA 272          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.614e-61
Identity = 111/154 (72.08%), Postives = 126/154 (81.82%), Query Frame = -2
Query:  203 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 664
            RKLSL R V Y++ QCLGAI GA +VKG  K  Y+ LGGGAN +S GYS    LGAEIVGTF+LVYTVFSATD KR ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+  AW DHWIFW GP IGA LAA YH++V+R
Sbjct:  120 RKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.514e-51
Identity = 100/163 (61.35%), Postives = 118/163 (72.39%), Query Frame = -2
Query:  185 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKS-QYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALI--YNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKS 664
            R++SL RA  Y + QC+GA+CGA + +      QY   GGGAN L+ GYS G G+ AE+VGTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG AL+      +AW   WIFW GPF GAA A +YH  ++R    K+
Sbjct:  107 RRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKA 269          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
PIP26_ORYSJ3.712e-6673.13Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP26_MAIZE3.712e-6677.42Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP23_ORYSJ3.712e-6677.42Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP28_ARATH6.332e-6672.50Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP21_ORYSJ6.332e-6671.25Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP27_ARATH1.842e-6572.50Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP26_ARATH1.842e-6572.96Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP1_ATRCA7.000e-6571.88Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP27_ORYSJ1.614e-6172.08Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ7.514e-5161.35Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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