DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.578e-24
Identity = 65/163 (39.88%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  182 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 664
            RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR      V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+W GP IGA LA ALY  +    +  K +
Sbjct:  108 RKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRR 261          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24
Identity = 64/163 (39.26%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  182 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 664
            RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR      +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+W GP IGA LA ALY  +    +  K +
Sbjct:  111 RKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRR 264          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.515e-24
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  182 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 664
            RK+S+ ++VFY+I QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+W GP +GA LA ALY  +    +  K +
Sbjct:  108 RKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYVFCPDVELKRR 261          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24
Identity = 63/163 (38.65%), Postives = 94/163 (57.67%), Query Frame = -2
Query:  182 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 664
            RK+S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    + G GL  E++ TF LV+T+F++ D+KR      +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+W GP IGA LA  LY  +    +  K +
Sbjct:  108 RKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRR 261          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 2.975e-23
Identity = 62/163 (38.04%), Postives = 93/163 (57.06%), Query Frame = -2
Query:  182 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA-ALYHQIVIRAIPFKSK 664
            R++S+ ++VFY+  QCLGAI GA ++  +  +   ++GG G   +    S G GL  E++ TF LV+T+F++ D+KR      +     L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+W GP IGA LA  LY  +    +  K +
Sbjct:  108 RRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRR 261          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.297e-22
Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = -2
Query:  203 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 661
            ++S+ ++V Y+ +QC+GAI GAAV+K         L  G +  S   + G  +  E + TF+LV  V   +D  R    + +   APL +G ++   HL  I +TG  +NPARS G A++ N    W DHW++W GP +GA +AAL ++ V +
Sbjct:   93 EMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.329e-22
Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = -2
Query:  200 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM--LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 658
            +S+ +A+FY+I+QC+GAI G+A++K    +++    G   M  L+ G +   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G A+  N D  W +HW++WAGP +G  +A + ++ + RA
Sbjct:   98 ISILKAIFYIIVQCVGAIAGSAILKVITPAEFR---GTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = -2
Query:  218 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 661
            ++SL RAVFY++ Q +GAI GAA++ G   + Y      A N L+   + G  + AE++ TF L   VFS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A+I ++  +   HW+FW GP +GAA AA+ +
Sbjct:   81 QISLLRAVFYLVAQLVGAIAGAAILYGL--APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIY 221          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21
Identity = 59/152 (38.82%), Postives = 88/152 (57.89%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            +LSL RA+ Y++ Q LGA+ GA V+ G   +      G  + L      G G   E++ T   +  VF++ D + + R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I    + + +HW+FWAGP +GAALAAL +++ +
Sbjct:   80 QLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLG-LSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 3.637e-21
Identity = 56/153 (36.60%), Postives = 87/153 (56.86%), Query Frame = -2
Query:  203 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 658
            +S+ +  FY++ QC+GAI GAAV+K    S  E++GG G   ++ G S G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G A++      + D W++W GP +G  +A   +++  +
Sbjct:   94 VSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
AQP4_RAT1.578e-2439.88Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL2.061e-2439.26Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE3.515e-2439.88Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME5.995e-2438.65Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_BOVIN2.975e-2338.04Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_HAEIX4.297e-2235.95Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP_CICVR7.329e-2236.77Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_SHEEP1.250e-2141.33Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
MIP_CHICK3.637e-2138.82Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_ANOGA3.637e-2136.60Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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