DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18
Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            +++  RA++Y I Q LGAI    +++        +       L+ G    +GL  EI+ TF LVY V+S   D KR +    + I+APL IG  V    L   P +G  +NPAR+ G AL+      W DHWI+W GPFIG+ALAAL ++ ++
Sbjct:  105 RVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18
Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            ++L R + Y+I Q LG+I  +A++     S     G     LS+G   G  L  EIV TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++WAGP IG  +A L ++++
Sbjct:   98 ITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            +SL +AV Y + Q LG++    ++K          GG   GA  LS G    + +  EIV TF LVYTV++ A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      WD+HW++W GPF+GAA+AAL + I+
Sbjct:   98 ISLVKAVVYWVAQLLGSVVACLLLK-------IATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.690e-18
Identity = 56/152 (36.84%), Postives = 84/152 (55.26%), Query Frame = -2
Query:  206 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 658
            +S  RA FY+  Q LGA+ GAA++   + +  E+ G  A N L    + G  +  E+  T  LV  +F++TD +R+           L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW GP +GA + +L +  ++
Sbjct:   81 VSFLRAAFYVAAQLLGAVAGAAILH--EITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18
Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            ++L R + Y+I Q LG+I  +A++     S     G     LS+G   G  L  EIV TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++WAGP IG  +A L ++++
Sbjct:   97 ITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18
Identity = 56/152 (36.84%), Postives = 83/152 (54.61%), Query Frame = -2
Query:  206 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 658
            +S  RA FY+  Q LGA+ GAA++   + +  E+ G  A N L    + G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW GP +GA + +L +  ++
Sbjct:   81 VSFLRAAFYVAAQLLGAVAGAAILH--EITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.764e-18
Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++SL RA+FY+  Q LGA+ GAAV+ G   +     G  A N L  G S G     EI  T   V  +F+  D +RN R   V     L IGF++ L HL  +  TG  +NPARS   A++      + +HW++W GP IG AL  L +  ++
Sbjct:   80 QMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIR--GNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS----LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18
Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++SL RA+ YM  Q LGA+ GAAV+  +  +   + G  A N L  G S G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   A++      + +HW++W GP IG  LA+L +  ++
Sbjct:   80 QMSLLRAICYMAAQLLGAVAGAAVL--YSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLASLLYDFLL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18
Identity = 56/153 (36.60%), Postives = 83/153 (54.25%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++SL RA+ YM+ Q LGA+ GAAV+  +  +   + G  A N L  G S G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   A++      + +HW++W GP IGA L +L +  ++
Sbjct:   80 QMSLLRAICYMVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 8.385e-18
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = -2
Query:  206 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQY-EMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 658
            +SL RAV Y+  Q +GA  GAA++ G       E LG   N++    S G  +  E++ T  LV  VF++TD+++ +      I      G +V L HL  I  TG  +NPARS G A+I  K   +  HW+FW GP +GA LA+L +  V+
Sbjct:   95 ISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLG--INVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATMI------GISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
TIP31_ARATH1.294e-1837.91Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP1_MEDTR1.294e-1837.09Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_ORYSJ1.690e-1838.31Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP2_MOUSE1.690e-1836.84Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP1_MEDSA2.882e-1837.09Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQP2_RAT2.882e-1836.84Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
MIP_RANPI3.764e-1837.25Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_RABIT6.420e-1836.60Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_BOVIN6.420e-1836.60Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQP6_HUMAN8.385e-1837.50Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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