DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG---GANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            +SL +A+ Y + Q LG++    ++K          GG   GA  LS G    + +  E+V TF LVYTV++ A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      W++HW++W GP  GAA+AAL + I+
Sbjct:   98 ISLLKALVYWVAQLLGSVVACLLLK-------IATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L  G S       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   A++    + + +HW++W GP IG  L +L +  ++
Sbjct:   80 QMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.009e-16
Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = -2
Query:  206 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQY-EMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 658
            +SL RAV Y+  Q  GA  GAA++ G       E LG   N++    S G  +  E+V T  LV  VF++ D+++        I      G +V L HL  I  TG  +NPARS G A+I  K      HWIFW GP  GA LA+L +  ++
Sbjct:   92 ISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETLG--VNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAMI------GTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAV---HWIFWVGPLTGAVLASLIYNFIL 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16
Identity = 54/149 (36.24%), Postives = 73/149 (48.99%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 634
            Y++ Q LGAI   AV+        GF  ++     G A     GYS    L  E+V T   +  +  ATD +  A        APL IG A+ L+HL +IP+T T +NPARS G AL      A    W+FW  P IGA L A  ++++
Sbjct:   83 YIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16
Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = -2
Query:  206 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQY-EMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLP-IGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 658
            +SL RA+ Y+  Q  GA  GAA++ G       E LG   N++    S G  +  E+V T  LV  VF++ D ++        + +P   IG +V L HL  I  TG  +NPARS G A+I  K      HWIFW GP  GA LA+L +  ++
Sbjct:   92 ISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLG--VNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQT-------LASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAV---HWIFWVGPLTGAVLASLIYNFIL 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15
Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L    S G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG G+NPARS   A++      + +HW++W GP IG  L +L +  ++
Sbjct:   80 QMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA----LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15
Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = -2
Query:  209 VFYMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 640
            V Y++ Q  GAI  AAV  V    K+ +++ G  AN   +    GYS    L  E+V T   +  +  +T        S VP+  AP+ IG  + L+HL +IP+T T +NPARS G AL    D A    W+FW  P IGA +A +  +IV
Sbjct:   82 VGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGSTH-------SRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQALFVG-DWAISQLWLFWVAPLIGAVIAGIVWKIV 224          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15
Identity = 51/145 (35.17%), Postives = 70/145 (48.28%), Query Frame = -2
Query:  230 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA 664
            R +S TR V   + Q +  +            +       AN L  G S+  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W GP +G+ LA
Sbjct:  129 RAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLF----ANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.339e-15
Identity = 57/163 (34.97%), Postives = 83/163 (50.92%), Query Frame = -2
Query:  218 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM-LSKGY-SKGDGLGA------------EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 664
            ++   T  + Y+  Q LG I GA V+       Y + GG A   LS G+ S G GL +            E+V TF+ +  +  +TD +           AP+ IG ++ L+HL +IP+T T +NPARS G AL    D A  + W+FW  P +GAALA L++
Sbjct:   76 KRFPATELLPYIAAQVLGGIAGAGVL-------YLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG------FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVG-DWAIAELWLFWLAPIVGAALAGLFY 224          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.284e-15
Identity = 55/159 (34.59%), Postives = 85/159 (53.46%), Query Frame = -2
Query:  200 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG----DGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAA-LYHQIVIRA 658
            +++   +FY I QCLG+     ++K         +  G ++ + G + G     G+  EI+ TF LVYTV++ A D K+ +    + ++AP+ IGF V    LA  P +G  +NPARS G A+       +  +WI+WAGP IG ALA  +Y  + I A
Sbjct:   96 ITILTGLFYWIAQCLGSTVACLLLK--------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITA 239          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
TIP12_MAIZE3.523e-1635.71Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
MIP_CAVPO4.601e-1635.29Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQP6_RAT6.009e-1637.50Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
AQPZ_CHRVO7.848e-1636.24Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQP6_MOUSE7.848e-1637.25Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
MIP_HUMAN1.025e-1534.64Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQPZ1_RHIME1.025e-1537.09Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQY1_YEAST1.339e-1535.17Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ_GLOVI1.339e-1534.97Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
TIP_ANTMA2.284e-1534.59Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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