DN621237

Overview
NameDN621237
Unique NameDN621237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.331e-48
Identity = 100/182 (54.95%), Postives = 128/182 (70.33%), Query Frame = 1
Query:   61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            +A G   ++    +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG+TVACLLL FVT+G+     A+ +G+     VVFE+V+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANI
Sbjct:    4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAV-AGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANI 184          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.739e-48
Identity = 96/186 (51.61%), Postives = 123/186 (66.13%), Query Frame = 1
Query:   55 RNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGA--NTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            R   VG   +ATHPD +RAA++EFI+T IFVFA EGS ++  K+ H+ +  +T                       N+SGGHVNPAVTFGA VGG +SL+R +LYW AQLLG+  A LLL+  T G     FAL+SGVG  +AV+ E VMTFG VY  YAT +DPK+G LGTIAP+A+GF++GAN+
Sbjct:   11 RRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANV 196          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.966e-48
Identity = 101/182 (55.49%), Postives = 128/182 (70.33%), Query Frame = 1
Query:   61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            +A G  R++    +L+A +AEFI+TL+FVFAG GS +A+++LT  GA  P+                     NISGGH+NPAVTFG  VGG+I++L GILYW+AQLLG++VAC LL++VT+GQ      + SG+     VV EIV+TF LVYTVYATA DPKKGSLGTIAP+AIGFIVGANI
Sbjct:    4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGV-SGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANI 184          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.472e-47
Identity = 99/182 (54.40%), Postives = 127/182 (69.78%), Query Frame = 1
Query:   61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            +A G   ++    +++A +AEFI+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YWIAQLLG+++ACLLLKFVT+G+      + +G+     VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANI
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGV-AGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANI 184          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 2.511e-47
Identity = 98/169 (57.99%), Postives = 117/169 (69.23%), Query Frame = 1
Query:  100 ALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            +LRA LAEFISTL+FVFAG GS +A+ KLT + A                         NISGGHVNPAVTFG  VGG I+++ G+ YWIAQLLGST AC LLK+VT G      ++++G+G+   VV EI++TF LVYTVYATA DPKKGSLGTIAP+AIG IVGANI
Sbjct:   17 SLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANI 185          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.627e-46
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   58 NIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            NIA G   ++    +L+A +AEFISTL+FVFAG GS +A+ KLT      P+                     NISGGHVNPAVTFG  +GG I++L G+ YWIAQLLG+ V  +L++F T G  T    LS GVGA+  VV EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANI
Sbjct:    4 NIAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGLS-GVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANI 184          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.475e-39
Identity = 83/185 (44.86%), Postives = 111/185 (60.00%), Query Frame = 1
Query:   52 IRNIAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            ++ I +GH  EA  PD ++A + EFI+T +FVFAG GS MA + L  N                           +ISGGH+NPAVT G  +GG+IS+ R  LYWI QLL S+ AC LL ++T G  T    L+SGV     +++EI++TF L++TVYAT +DPKKGSL    P+  GF+VGANI
Sbjct:    1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTL----VGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANI 181          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.437e-34
Identity = 80/182 (43.96%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   64 AVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            A+GH REA+    +RA LAE I T +FVFAG GS MA  KL   G +T                       ++SGGH+NPAVT G    G I+L R  LY  AQLLGST+ACLLL F+    +     AL +GVGA   V+ E V+TF L++ VYAT +DP++ ++G + P+ +G +VGAN+
Sbjct:    5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANV 185          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.092e-34
Identity = 81/183 (44.26%), Postives = 110/183 (60.11%), Query Frame = 1
Query:   61 IAVGHPREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG-QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            +A+GH REAT P  LRA +AE + T +FVF+G GS MA  KL   G +T                       ++SGGH+NPAVT G   GG+I+L R  LY  AQLLGS++ACLLL  +T G +     A + GVGA  AV  E V+TF L++ VYAT +D ++ ++G + P+ +G +VGANI
Sbjct:    4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLG-GGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVD-RRRAVGALGPLLVGLVVGANI 184          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.210e-33
Identity = 80/171 (46.78%), Postives = 99/171 (57.89%), Query Frame = 1
Query:   94 PDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANI 606
            P A RAAL+EF++T +FVFA EGS     K+ +    T                       N SGGHVNPAVTFG  VG  IS  R  LYW AQLLG+ +A LLL+  + G     F L   +   +A++ E+VMTFGLVYTVYATA+D + G  G IAP+AIG + GANI
Sbjct:   25 PGATRAALSEFVATAVFVFAAEGSVYGLWKM-YRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANI 193          
The following BLAST results are available for this feature:
BLAST of DN621237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
TIP21_MAIZE1.331e-4854.95Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP32_MAIZE1.739e-4851.61Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP23_MAIZE2.966e-4855.49Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP21_ORYSJ1.472e-4754.40Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH2.511e-4757.99Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP22_ORYSJ1.627e-4656.28Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH1.475e-3944.86Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP44_MAIZE2.437e-3443.96Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP43_ORYSJ7.092e-3444.26Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP32_ORYSJ1.210e-3346.78Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621237 ID=DN621237; Name=DN621237; organism=Citrus sinensis; type=EST; length=607bp
GTAATCACACCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCC
GATCAGAAACATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATG
CCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTT
GCCGGTGAAGGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGC
CAACACCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCC
TTTTCGTTGCTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAAT
CCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACG
AGGCATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCT
TGCTTCTTAAGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTC
TCATCTGGAGTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGAC
ATTCGGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGG
GAAGCTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCC
AACATCT
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