DN621237

Overview
NameDN621237
Unique NameDN621237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 64/187 (34.22%), Postives = 90/187 (48.13%), Query Frame = 1
Query:   82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            E T     RA +AEFI+TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   33 ELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 216          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 58/164 (35.37%), Postives = 80/164 (48.78%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGF 588
            RA  AEF +TL +VF G G+ + +       A  P                      +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF
Sbjct:   11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGF 166          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16
Identity = 64/187 (34.22%), Postives = 90/187 (48.13%), Query Frame = 1
Query:   82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            E T     RA +AEFI+TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   34 ELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 217          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.909e-16
Identity = 58/177 (32.77%), Postives = 87/177 (49.15%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            RA +AEF++TL+F++    + + +   T   A+ P                             ISGGH+NPAVTFG F+   +SL+R +LY  AQ LG+     L+K   +G        A  +S+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 216          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-16
Identity = 61/187 (32.62%), Postives = 91/187 (48.66%), Query Frame = 1
Query:   82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            E T     RA +AEF++TL+F++    + + +   T   A+ P                             +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   29 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYG--GGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 212          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-16
Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = 1
Query:   82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            E T     RA +AEF++TL+F++    + + +   +  GAN                               +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   34 ELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 217          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-16
Identity = 57/164 (34.76%), Postives = 80/164 (48.78%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGF 588
            RA  AEF ++L +VF G G+ + +       A  P                      +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF
Sbjct:   11 RAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGF 166          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.668e-16
Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGAN----TPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            RA +AEFI+TL+F++    + + +   T    N    T                        ISGGH+NPAVTFG  +   ++L+R ++Y +AQ LG+     L+K   +   T     A  LS G      V  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   38 RALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 211          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.668e-16
Identity = 58/164 (35.37%), Postives = 78/164 (47.56%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGF 588
            RA  AEF +TL +VF G G+ + +       A  P                      +ISG HVNPAVTF   VG  +SLLR I Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG++A +A+GF
Sbjct:   11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGF 166          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.668e-16
Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX--NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++ ++F+F   GS + F+    +   T +                       +ISG H+NPAVT G  +   IS+LR I+Y IAQ +G+ VA ++L  +T+    ++    AL+ GV +   +  EI+ T  LV  V AT    ++  LG   P+AIGF V
Sbjct:   12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSV 179          
The following BLAST results are available for this feature:
BLAST of DN621237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
PIP24_MAIZE2.292e-1634.22Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
MIP_SHEEP2.292e-1635.37Lens fiber major intrinsic protein OS=Ovis aries G... [more]
PIP23_MAIZE2.993e-1634.22Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP26_MAIZE3.909e-1632.77Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP25_MAIZE5.106e-1632.62Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP23_ORYSJ5.106e-1632.62Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
MIP_BOVIN5.106e-1634.76Lens fiber major intrinsic protein OS=Bos taurus G... [more]
PIP25_ARATH6.668e-1633.14Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
MIP_RABIT6.668e-1635.37Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQP1_SHEEP6.668e-1632.74Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621237 ID=DN621237; Name=DN621237; organism=Citrus sinensis; type=EST; length=607bp
GTAATCACACCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCC
GATCAGAAACATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATG
CCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTT
GCCGGTGAAGGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGC
CAACACCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCC
TTTTCGTTGCTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAAT
CCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACG
AGGCATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCT
TGCTTCTTAAGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTC
TCATCTGGAGTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGAC
ATTCGGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGG
GAAGCTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCC
AACATCT
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