DN621237

Overview
NameDN621237
Unique NameDN621237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.668e-16
Identity = 55/166 (33.13%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++  +FVF   GS + FN                                +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V
Sbjct:   12 RAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSV 176          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            RAA+AEFI+TL+F++    + + + K T   A+                         ISGGH+NPAVTFG F+   +SLLR ++Y IAQ  G+     L+K    G        A +++ G     A   E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   40 RAAIAEFIATLLFLYITVATVIGYKKETDPCASV--GLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAV 207          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 55/166 (33.13%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++  +FVF   GS + FN                                +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V
Sbjct:   12 RAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSV 176          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 56/168 (33.33%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNG--ANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++  +F+F   GS + F     N   +                         +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+   G +    +L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIGF V
Sbjct:   12 RAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGFSV 178          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 56/168 (33.33%), Postives = 82/168 (48.81%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNG--ANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++ ++FVF   GS + FN    N   A                         +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIG  V
Sbjct:   12 RAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGLSV 178          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 61/185 (32.97%), Postives = 87/185 (47.03%), Query Frame = 1
Query:   82 EATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            E T     RA +AEFI+TL+F++    + + +   +    NT                              ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K   +         A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   33 ELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAV 216          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 55/170 (32.35%), Postives = 83/170 (48.82%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTP----SXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++ ++FVF   G+ + FN      AN                            ++SG H+NPAVT G  +   IS+L+ ++Y IAQ LG+ VA  +L  +T+G   ++     LS GV A   +  EI++TF LV  V A   D ++  +    P+AIG  V
Sbjct:   12 RAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVT-DRRRHDVSGSVPLAIGLSV 180          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 55/166 (33.13%), Postives = 79/166 (47.59%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++  +FVF   GS + F     N                           +ISG H+NPAVT G  +   IS+ R ++Y IAQ +G+ VA  +L  +T+   G +     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V
Sbjct:   12 RAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSV 176          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 63/186 (33.87%), Postives = 90/186 (48.39%), Query Frame = 1
Query:   76 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFN-----KLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQ----LLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIV 594
            P E T     RAA+AEFI+TL+F++    + + +      K+  N                            ISGGH+NPAVTFG F+G  +SL+R +LY IAQ    + G+ +A    K   N        +S G     A+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V
Sbjct:   30 PDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 214          
BLAST of DN621237 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  106 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX--NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAF---ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIV 594
            RA +AEF++ ++F+F   GS + F+    +   T +                       +ISG H+NPAVT G  +   IS+LR I+Y IAQ +G+ VA  +L  +T+    ++    AL+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIGF V
Sbjct:   12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGFSV 178          
The following BLAST results are available for this feature:
BLAST of DN621237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
AQP1_MOUSE6.668e-1633.13Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
PIP1_ATRCA8.709e-1634.50Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
AQP1_RAT8.709e-1633.13Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PIG8.709e-1633.33Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA8.709e-1633.33Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
PIP22_ORYSJ1.486e-1532.97Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
AQPA_RANES1.486e-1532.35Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_PONAB1.486e-1533.13Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
PIP27_MAIZE1.940e-1533.87Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
AQP1_BOVIN1.940e-1533.33Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621237 ID=DN621237; Name=DN621237; organism=Citrus sinensis; type=EST; length=607bp
GTAATCACACCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCC
GATCAGAAACATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATG
CCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTT
GCCGGTGAAGGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGC
CAACACCCCCTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCC
TTTTCGTTGCTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAAT
CCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACG
AGGCATCCTCTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCT
TGCTTCTTAAGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTC
TCATCTGGAGTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGAC
ATTCGGACTAGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGG
GAAGCTTGGGGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCC
AACATCT
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