DN621236

Overview
NameDN621236
Unique NameDN621236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.558e-63
Identity = 118/178 (66.29%), Postives = 138/178 (77.53%), Query Frame = -2
Query:  194 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 727
            V++ ANISGGH+NPAVT G  VGGNI++L G  YWIAQLLGSTVACLLLK+VTNG       +++G+  +  VV EI++TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+V+  +  +W+YW GPLIGGGLAG +Y   FI   H  LPT+E
Sbjct:   71 VSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFIG-CHTPLPTSE 247          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.471e-63
Identity = 118/178 (66.29%), Postives = 137/178 (76.97%), Query Frame = -2
Query:  194 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 727
            V++ ANISGGH+NPAVT G  VGGNI++L G  YWIAQLLGSTVACLLLK+VTNG       +++G+     VV EI++TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+V+  +  +W+YW GPLIGGGLAG +Y   FI   H  LPT+E
Sbjct:   71 VSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFIG-CHTPLPTSE 247          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.733e-63
Identity = 106/167 (63.47%), Postives = 132/167 (79.04%), Query Frame = -2
Query:  227 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 727
            VAV  NISGGHVNPA+TFGA +GG +SL+R + YW+AQLLG+ VA LLL+  T G     FAL+SGVG W+AV+ E  MTFGL+Y  YAT +DPK+G +GTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPALV W W +HWVYW+GP +G GLAG++YE+  I
Sbjct:   78 VAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVI 244          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.010e-62
Identity = 117/179 (65.36%), Postives = 140/179 (78.21%), Query Frame = -2
Query:  191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 727
            V+V AN SGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG++VACLLL+FVT+G+      +S G      VVFEIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ +  +  +WVYWVGPLIGGGLAG+VY   FI  S++Q+   +Y
Sbjct:   71 VSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDVFIGGSYQQVADQDY 249          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.010e-62
Identity = 117/179 (65.36%), Postives = 142/179 (79.33%), Query Frame = -2
Query:  191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 727
            V+V ANISGGH+NPAVTFG  VGG+I++L G+ YW+AQLLG+TVACLLL FVT+G+     A++ G+     VVFE+V+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ +  +  +WVYWVGPL+GGGLAG+VY   FI  S++Q+   +Y
Sbjct:   71 VSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAGLVYGDVFIGGSYQQVADQDY 248          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.319e-62
Identity = 112/185 (60.54%), Postives = 136/185 (73.51%), Query Frame = -2
Query:  191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI------NQSHEQLPTTEY 727
            VAV  N+SGGHVNPAVTFGA VGG +SL+R +LYW AQLLG+  A LLL+  T G     FAL+SGVG  +AV+ E VMTFG VY  YAT +DPK+G LGTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPALV W W +HWVYW+GP +G GLAG+VYE+  I        +H+ L   +Y
Sbjct:   82 VAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLLIPPADAVPHTHQPLAPEDY 266          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.319e-62
Identity = 115/180 (63.89%), Postives = 139/180 (77.22%), Query Frame = -2
Query:  191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS-HEQLPTTEY 727
            VA+GANISGGHVNPAVTFG  VGG I+++ G+ YWIAQLLGST AC LLK+VT G      ++++G+G+   VV EI++TF LVYTVYATA DPKKGSLGTIAP+AIG IVGANILA G F G SMNPA SFGPA+ +  +  HWVYWVGPLIGGGLAG++Y   F+  S H  L + ++
Sbjct:   71 VAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPLASADF 250          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.250e-62
Identity = 118/178 (66.29%), Postives = 138/178 (77.53%), Query Frame = -2
Query:  194 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 727
            V++ ANISGGH+NPAVT G  VGGNI+++ G  YWIAQ LGS VACLLL FVTNG++     +++G+GA   VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+VS  +   W+YWVGPL+GG LAG++Y   FI  S+   PTTE
Sbjct:   71 VSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG-SYAPAPTTE 247          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.939e-62
Identity = 108/167 (64.67%), Postives = 130/167 (77.84%), Query Frame = -2
Query:  227 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 727
            V+   N+SGGHVNPAVTFGA VGG ++ +R I YWIAQLLG+ +ACLLL+  TNG     F L+SGVGA N +V EI++TFGLVY VY+T +DPK+GSLG IAP+AIG IVGANIL GG F GASMNPA +FGPALV W W +HW+YWVGP IG  LA ++YE+  I
Sbjct:   81 VSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVI 247          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.012e-62
Identity = 116/178 (65.17%), Postives = 137/178 (76.97%), Query Frame = -2
Query:  194 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 727
            V++ AN+SGGH+NPAVT G  VGGNI++L G+ YWIAQ LGSTVACLLLKFVTNG +     +++G+ A   VV EI++TF LVYTVYATA DPKKGSLG IAPIAIGFIVGANILA G F G SMNPA SFGPA+ S  +  +W+YW GPLIGG LAG +Y   FI  +H  LPT+E
Sbjct:   71 VSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFIT-AHAPLPTSE 247          
The following BLAST results are available for this feature:
BLAST of DN621236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
TIP2_TOBAC1.558e-6366.29Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC3.471e-6366.29Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP31_ORYSJ7.733e-6363.47Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP22_MAIZE1.010e-6265.36Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP21_MAIZE1.010e-6265.36Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP32_MAIZE1.319e-6260.54Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP21_ARATH1.319e-6263.89Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP22_ARATH2.250e-6266.29Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP31_ARATH2.939e-6264.67Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP_ANTMA5.012e-6265.17Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621236 ID=DN621236; Name=DN621236; organism=Citrus sinensis; type=EST; length=728bp
TAGAAAACAAAGCCATAGCCNTGGGACTCCATAATTATCGCGATACAATA
ATCCAGCAGCTCATGACGATGGAAACAGATCAACGGCCATAAATTAAACA
CAAATTAAAAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAA
CATCCGTGCAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTT
GTTGGGAGCTGCTCGTGAGACTGGTTAATGAAGAAGAACTCGTAGACGAT
GCCAGCTAGCCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGT
TGTCCCAGCTCCAGCTTACCAAAGCTGGCCCGAATGACACTGCTGGGTTC
ATTGAAGCTCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAAT
GAAACCAATTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGT
CCAGGGCTGTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATC
TCGAAAACGACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGC
AGATGTGGTCTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGG
TGGATCCAAGAAGCTGGGCGATCCAGTAGAGGATGCCTCGTAGAAGGGAG
ATGTTACCTCCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCC
ACCGGAAATGTTGGCGCCAACGGCGACA
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