DN621236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.550e-62 Identity = 118/178 (66.29%), Postives = 137/178 (76.97%), Query Frame = -2 Query: 194 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 727 V++ ANISGGH+NPAVT G +GGNI+L+ G YWIAQ LGS VACLLL FVTNG++ +S+G+GA VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+VS W+YWVGPL+GG LAG++Y FI S+E + T E Sbjct: 71 VSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFIG-SYEAVETRE 247
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.243e-61 Identity = 104/172 (60.47%), Postives = 132/172 (76.74%), Query Frame = -2 Query: 212 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 727 V+ N+SGGHVNPAVTF A +GG IS++R I YW+AQL+G+ +ACLLL+ TNG F ++SGV + ++ EI++TF LVY VY+TA+DPK+GS+G IAP+AIG IVGANIL GG FDGASMNPA +FGPALV W W NHW+YWVGP IGG LA ++YE+ I +E Sbjct: 81 VSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIYEYMIIPSVNE 252
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.542e-61 Identity = 115/179 (64.25%), Postives = 139/179 (77.65%), Query Frame = -2 Query: 191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 727 VA+GANISGGHVNPAVTFG +GG I++L G+ YWIAQLLG+ V +L++F T G T LS GVGA+ VV EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL G F G SMNPA SFGPA+ S + N W+YWVGPL+GGGLAG+VY + ++ H + ++E+ Sbjct: 72 VAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGLS-GVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVASSEF 248
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.750e-60 Identity = 116/179 (64.80%), Postives = 141/179 (78.77%), Query Frame = -2 Query: 191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 727 V+V ANISGGH+NPAVTFG VGG+I++L G+ YWIAQLLG+++ACLLLKFVT+G+ ++ G+ VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ + ++ +WVYWVGPLIGGGLAG+VY FI S++ + +Y Sbjct: 71 VSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVA-GISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFIG-SYQPVADQDY 247
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 1.045e-59 Identity = 115/179 (64.25%), Postives = 141/179 (78.77%), Query Frame = -2 Query: 191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 727 V++ ANISGGH+NPAVTFG VGG+I++L GILYW+AQLLG++VAC LL++VT+GQ +S G+ VV EIV+TF LVYTVYATA DPKKGSLGTIAP+AIGFIVGANILA G F G SMNPA SFGPA+ + ++ +WVYWVGPL+GGGLAG+VY FI S++ + EY Sbjct: 71 VSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGVS-GISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAGLVYGDVFI-ASYQPVGQQEY 247
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.783e-59 Identity = 105/184 (57.07%), Postives = 135/184 (73.37%), Query Frame = -2 Query: 191 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI-----NQSHEQLPTTEY 727 V+ ++SGGHVNPAV+FGA +GG IS++R + YWIAQLLGS VA L+L+ VTN S F +S GVG + + E+VMTFGL+YTVY TA+DPK+G++ IAP+AIG IVGANIL GG FDGA MNPA++FGP+LV W W HW++WVGPL+G LA +VYE+ I H+ L T +Y Sbjct: 73 VSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIEPPPHHHQPLATEDY 256
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.855e-57 Identity = 102/166 (61.45%), Postives = 126/166 (75.90%), Query Frame = -2 Query: 215 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSH 712 +ISGGH+NPAVT G +GG+IS+ R LYWI QLL S+ AC LL ++T G T L+SGV +++EI++TF L++TVYAT +DPKKGSL P+ GF+VGANILAGGAF GASMNPA SFGPALVS +W +HWVYWVGPLIGGGLAG +YE I++ H Sbjct: 72 HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENVLIDRPH 237
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.727e-54 Identity = 102/169 (60.36%), Postives = 122/169 (72.19%), Query Frame = -2 Query: 221 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ 727 VAV N SGGHVNPAVTFG VG IS R LYW AQLLG+ +A LLL+ + G F L + +A++ E+VMTFGLVYTVYATA+D + G G IAP+AIG + GANILAGG FDGA+MNPA +FGPALV W+W +HWVYW+GPLIG G+AG +YEF Q Sbjct: 80 VAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQ 247
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.401e-50 Identity = 99/177 (55.93%), Postives = 127/177 (71.75%), Query Frame = -2 Query: 203 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLP 727 V+ G ++SGGH+NPAVT G G I+L R LY AQLLGST+ACLLL F+ + AL +GVGA V+ E V+TF L++ VYAT +DP++ ++G + P+ +G +VGAN+LAGG F GASMNPA SFGPALV+ W +HWVYWVGPLIGG LAG+VY+ F+ Q HE LP Sbjct: 71 VSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLP 246
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.673e-49 Identity = 97/180 (53.89%), Postives = 127/180 (70.56%), Query Frame = -2 Query: 194 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-QSHEQLPTTE 727 V+ G ++SGGH+NPAVT G GG+I+L R LY AQLLGS++ACLLL +T G+ A + GVGA AV E V+TF L++ VYAT +D ++ ++G + P+ +G +VGANILAGG + GASMNPA SFGPAL + W +HW+YWVGPLIGG LAG+VYE F+ HE LP + Sbjct: 70 VSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRND 248 The following BLAST results are available for this feature:
BLAST of DN621236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621236 ID=DN621236; Name=DN621236; organism=Citrus sinensis; type=EST; length=728bpback to top |