DN621236

Overview
NameDN621236
Unique NameDN621236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31
Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = -2
Query:  236 AVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 724
            AVG +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IG GL  ++Y+F
Sbjct:   58 AVG-HISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDF 221          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31
Identity = 75/166 (45.18%), Postives = 101/166 (60.84%), Query Frame = -2
Query:  236 AVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 724
            AVG +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   58 AVG-HISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = -2
Query:  236 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 712
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   61 HISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31
Identity = 71/162 (43.83%), Postives = 99/162 (61.11%), Query Frame = -2
Query:  236 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 712
            ++SG H+NPAVTF   +G  +SL R I Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG+++ +AIGF +    L G  + GASMNPA SF PA+++ ++ NHWVYWVGP+IGG L G+VY+F
Sbjct:   61 HVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS-LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRNFTNHWVYWVGPIIGGALGGLVYDF 221          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31
Identity = 71/162 (43.83%), Postives = 97/162 (59.88%), Query Frame = -2
Query:  236 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 712
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++    V    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA-LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31
Identity = 71/162 (43.83%), Postives = 98/162 (60.49%), Query Frame = -2
Query:  236 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 712
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G +G++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   59 HISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDF 219          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31
Identity = 71/162 (43.83%), Postives = 98/162 (60.49%), Query Frame = -2
Query:  236 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 712
            +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G +G++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.630e-30
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = -2
Query:  230 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 712
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   93 HISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 255          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.127e-29
Identity = 66/164 (40.24%), Postives = 100/164 (60.98%), Query Frame = -2
Query:  230 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 712
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G++A +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 252          
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.472e-29
Identity = 67/164 (40.85%), Postives = 100/164 (60.98%), Query Frame = -2
Query:  230 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 712
            +ISGGH+NPAVT        IS+ + + Y IAQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W NHW+YWVGP++G  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVF 252          
The following BLAST results are available for this feature:
BLAST of DN621236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
MIP_SHEEP1.204e-3145.18Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_CANFA2.054e-3145.18Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_CAVPO3.504e-3144.44Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_RANPI5.976e-3143.83Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_HUMAN5.976e-3143.83Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_RAT7.805e-3143.83Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE7.805e-3143.83Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQP4_NOTAL8.630e-3040.85Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_RAT1.127e-2940.24Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_MOUSE1.472e-2940.85Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621236 ID=DN621236; Name=DN621236; organism=Citrus sinensis; type=EST; length=728bp
TAGAAAACAAAGCCATAGCCNTGGGACTCCATAATTATCGCGATACAATA
ATCCAGCAGCTCATGACGATGGAAACAGATCAACGGCCATAAATTAAACA
CAAATTAAAAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAA
CATCCGTGCAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTT
GTTGGGAGCTGCTCGTGAGACTGGTTAATGAAGAAGAACTCGTAGACGAT
GCCAGCTAGCCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGT
TGTCCCAGCTCCAGCTTACCAAAGCTGGCCCGAATGACACTGCTGGGTTC
ATTGAAGCTCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAAT
GAAACCAATTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGT
CCAGGGCTGTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATC
TCGAAAACGACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGC
AGATGTGGTCTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGG
TGGATCCAAGAAGCTGGGCGATCCAGTAGAGGATGCCTCGTAGAAGGGAG
ATGTTACCTCCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCC
ACCGGAAATGTTGGCGCCAACGGCGACA
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