DN621181

Overview
NameDN621181
Unique NameDN621181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.020e-60
Identity = 112/225 (49.78%), Postives = 152/225 (67.56%), Query Frame = 3
Query:    3 TIFFLTPAGTLRPIAIELTRPPMNGK---PQWKQVFLPSWH------STECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWW 650
            T+ FL   GTL P+AIEL+ P +           V+ P+        + E W+W+LAKA+V  +D  +HQL+SHWL TH   EP+VIATNRQLSV HP+++LL PH+R TM IN LARQ L+N  GI E +  P K+++  SS  Y K W F  +ALP DL+ RG+AV DP++P+ ++L IEDYP+ANDGL +W AI+QW T+Y+  YYP+  +++ D ELQAWW
Sbjct:  452 TLLFLRGDGTLAPLAIELSLPHLQDDGLITARSTVYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHWLNTHAVMEPFVIATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHALAMSSAFY-KDWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLAIYYPNDGVLQGDAELQAWW 675          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 77/215 (35.81%), Postives = 123/215 (57.21%), Query Frame = 3
Query:    6 IFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWL-WKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            + +L P G L P+AI+L++ P    P    +FLP    T+C L W LAK  V   +   H+  +H+L TH   E + +AT RQL + HP+Y+LL PH RYT+++N +AR  L+N DG+++   S G+  + +        + +    LP  + +RG+            LTI +Y + +DGL +W AI+++V++ V++YYP  + V+ D ELQAW
Sbjct:  352 LLWLNPQGVLLPLAIQLSQTPGPESP----IFLP----TDCELDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFSMATLRQLPLCHPVYKLLLPHTRYTLQVNTIARATLLNPDGLVDKVTSIGRQGLIYLMSTGLAHFTYTDFCLPDSIRARGV------------LTIPNYHYRDDGLKIWAAIERFVSEIVSYYYPSDASVQQDCELQAW 546          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LOXE3_HUMAN (Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 75/214 (35.05%), Postives = 120/214 (56.07%), Query Frame = 3
Query:    6 IFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            + +L+P G L P+AI+L++ P    P    +FLP+      W W LAK  V   +   H+  +H+L TH   E + +AT RQL + HPIY+LL PH RYT+++N +AR  L+N +G+++   S G+  + +        + + +  LP  L +RG+            L I +Y + +DGL +W AI+ +V++ V +YYP  + V+ D ELQAW
Sbjct:  352 LLWLSPQGALVPLAIQLSQTPGPDSP----IFLPTDSE---WDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFAMATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGLIYLMSTGLAHFTYTNFCLPDSLRARGV------------LAIPNYHYRDDGLKIWAAIESFVSEIVGYYYPSDASVQQDSELQAW 546          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX15B_MOUSE (Arachidonate 15-lipoxygenase B OS=Mus musculus GN=Alox15b PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29
Identity = 78/208 (37.50%), Postives = 111/208 (53.37%), Query Frame = 3
Query:   24 AGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            +G L PIAI+L + P    P    +FLPS    + W W LAK  V   +   H+ V+H L  H   E + +AT RQL   HP+++LL PH RYT+ IN LAR+ LV    +I+ S   G            +Q  +    LP+D+ +RG  VED          I  Y + +DG+ +W AIK +V++ V+ YYP  + V+ D+ELQAW
Sbjct:  324 SGPLLPIAIQLKQTPGPDNP----IFLPS---DDTWDWLLAKTWVRNSEFYIHEAVTHLLHAHLIPEVFALATLRQLPRCHPLFKLLIPHIRYTLHINTLARELLVAPGKLIDKSTGLGTGGFSDLIKRNMEQLNYSVLCLPEDIRARG--VED----------IPGYYYRDDGMQIWGAIKSFVSEIVSIYYPSDTSVQDDQELQAW 512          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX12B_HUMAN (Arachidonate 12-lipoxygenase, 12R type OS=Homo sapiens GN=ALOX12B PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.275e-28
Identity = 72/209 (34.45%), Postives = 109/209 (52.15%), Query Frame = 3
Query:   21 PAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            P G + PIAI+L++ P    P    +FLPS      W W LAK  V   +   H+ ++H L TH   E + +A  R L + HP+Y+LL PH RYT++IN + R  L+N  G+     S G        V    +  +D   LP D + RG  V+D          +  Y + +D L +W+A++++VT+ + +YYP  + VE D ELQ+W
Sbjct:  347 PEGKMMPIAIQLSQTPGPDCP----IFLPSDSE---WDWLLAKTWVRYAEFYSHEAIAHLLETHLIAEAFCLALLRNLPMCHPLYKLLIPHTRYTVQINSIGRAVLLNEGGLSAKGMSLGVEGFAGVMVRALSELTYDSLYLPNDFVERG--VQD----------LPGYYYRDDSLAVWNALEKYVTEIITYYYPSDAAVEGDPELQSW 536          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX15B_HUMAN (Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=ALOX15B PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.618e-28
Identity = 73/216 (33.80%), Postives = 116/216 (53.70%), Query Frame = 3
Query:    3 TIFFLTPA-GTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            T+ + +P  G L P+AI+L++ P    P    +FLP+    + W W LAK  V   +  +H+ ++H L +H   E + +AT RQL   HP+++LL PH RYT+ IN LAR+ L+    +++ S   G            KQ  +    LP+D+ +RG  VED          I  Y + +DG+ +W A++++V++ +  YYP    V+ D ELQAW
Sbjct:  315 TLLYQSPGCGPLLPLAIQLSQTPGPNSP----IFLPT---DDKWDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIVPGQVVDRSTGIGIEGFSELIQRNMKQLNYSLLCLPEDIRTRG--VED----------IPGYYYRDDGMQIWGAVERFVSEIIGIYYPSDESVQDDRELQAW 511          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX15B_RAT (Arachidonate 15-lipoxygenase B OS=Rattus norvegicus GN=Alox15b PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.780e-26
Identity = 71/216 (32.87%), Postives = 112/216 (51.85%), Query Frame = 3
Query:    3 TIFFLTP-AGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            T+ + +P +G L PIAI+L + P    P    +FLPS    + W W LAK  V   +   H+ ++H L  H   E + +AT RQL   HP+++LL PH RYT+ IN LAR+ L+    +++ S   G            +Q  +    LP+D+ +R +              +  Y + +DG+ +W AI+ +V++ V+ YYP  + V  D+ELQAW
Sbjct:  316 TLLYQSPGSGPLLPIAIQLKQTPGPDNP----IFLPS---DDKWDWLLAKTWVRNAEFSIHEALTHLLHAHLIPEVFALATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIAPGKVVDKSTGLGIGGFSDLIKRNMEQLSYSVLCLPEDIRARDVG------------DLPGYYYRDDGMQIWSAIRSFVSEIVDIYYPSDASVRDDQELQAW 512          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX12B_RAT (Arachidonate 12-lipoxygenase, 12R type OS=Rattus norvegicus GN=Alox12b PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.380e-25
Identity = 69/209 (33.01%), Postives = 107/209 (51.20%), Query Frame = 3
Query:   21 PAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            P G + PIAI+L++ P    P    +FLP+      W W LAK  V   +   H+ V+H L +H   E + +A  R L + HP+Y+LL PH RY ++IN + R  L+N  G+   + S G        V    +  +    +P D + RG  V+D          +  Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W
Sbjct:  347 PDGNMMPIAIQLSQTPGPDCP----IFLPNDSE---WDWLLAKTWVRYAEFYSHEAVAHLLESHLIGEAFCLALLRNLPMCHPLYKLLIPHTRYNVQINSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSLCIPNDFVERG--VQD----------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCW 536          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX12B_MOUSE (Arachidonate 12-lipoxygenase, 12R type OS=Mus musculus GN=Alox12b PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.380e-25
Identity = 69/209 (33.01%), Postives = 107/209 (51.20%), Query Frame = 3
Query:   21 PAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            P G + PIAI+L++ P    P    +FLP+      W W LAK  V   +   H+ V+H L +H   E + +A  R L + HP+Y+LL PH RY ++IN + R  L+N  G+   + S G        V    +  +    +P D + RG  V+D          +  Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W
Sbjct:  347 PDGNMMPIAIQLSQTPGPDCP----IFLPNDSE---WDWLLAKTWVRYAEFYSHEAVAHLLESHLIGEAFCLALLRNLPMCHPLYKLLIPHTRYNVQINSIGRALLLNKGGLSARAMSLGLEGFAQVMVRGLSELTYKSLCIPNDFVERG--VQD----------LPGYYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCW 536          
BLAST of DN621181 vs. ExPASy Swiss-Prot
Match: LX12E_MOUSE (Arachidonate 12-lipoxygenase, epidermal-type OS=Mus musculus GN=Alox12e PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.244e-25
Identity = 82/211 (38.86%), Postives = 104/211 (49.29%), Query Frame = 3
Query:   15 LTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAW 647
            L P G L P+ I+L +PP +G P    +FLPS        W LAK  V + D   HQL SH LR H   E   +AT R L  +HPIY+LL PHFRYTMEIN LAR  LV+  GI +   S G                +     P DL  RGL         G+K ++    +A D L LW+ I ++V   V  +Y   + V+ D ELQ W
Sbjct:  305 LQPDGRLLPMVIQL-QPPRHGCPP-PLLFLPS---DPPMAWLLAKIWVRSSDFQLHQLQSHLLRGHLMAEVISVATMRSLPSLHPIYKLLAPHFRYTMEINTLARNNLVSEWGIFDLVVSTGSGGHVDILQRATSCLTYRSFCPPDDLADRGLV--------GVKSSL----YAQDALRLWEIISRYVERMVELFYRSDTDVKEDPELQVW 498          
The following BLAST results are available for this feature:
BLAST of DN621181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX2_ORYSJ5.020e-6049.78Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOXE3_MOUSE2.871e-3135.81Epidermis-type lipoxygenase 3 OS=Mus musculus GN=A... [more]
LOXE3_HUMAN2.871e-3135.05Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=A... [more]
LX15B_MOUSE7.817e-2937.50Arachidonate 15-lipoxygenase B OS=Mus musculus GN=... [more]
LX12B_HUMAN2.275e-2834.45Arachidonate 12-lipoxygenase, 12R type OS=Homo sap... [more]
LX15B_HUMAN6.618e-2833.80Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=... [more]
LX15B_RAT2.780e-2632.87Arachidonate 15-lipoxygenase B OS=Rattus norvegicu... [more]
LX12B_RAT1.380e-2533.01Arachidonate 12-lipoxygenase, 12R type OS=Rattus n... [more]
LX12B_MOUSE1.380e-2533.01Arachidonate 12-lipoxygenase, 12R type OS=Mus musc... [more]
LX12E_MOUSE5.244e-2538.86Arachidonate 12-lipoxygenase, epidermal-type OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06F19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006F19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621181 ID=DN621181; Name=DN621181; organism=Citrus sinensis; type=EST; length=651bp
GCACAATTTTCTTCCTAACACCAGCCGGCACATTGAGACCAATAGCTATT
GAGCTCACTCGGCCTCCAATGAATGGCAAGCCACAATGGAAACAAGTGTT
TTTACCTTCTTGGCACTCTACTGAGTGCTGGCTTTGGAAGCTAGCCAAAG
CTCATGTCCTTGCTCATGATGCTGGCTATCACCAGCTTGTCAGCCATTGG
TTAAGAACTCATTGTTGCACAGAACCTTACGTAATAGCAACCAATCGGCA
ACTCAGCGTGATGCATCCAATCTATAGATTGTTGGATCCTCATTTTCGAT
ACACAATGGAGATCAATGGTTTGGCTCGACAAGCTCTTGTTAATGCTGAT
GGAATCATTGAAAGCTCATTCTCACCTGGAAAGTACTCTATGGAATTCAG
CTCTGTTGCCTATGACAAGCAATGGCGCTTTGACCATGAAGCACTCCCCA
AAGACCTAATTAGCCGGGGATTGGCTGTTGAAGATCCAAGTGCTCCACAT
GGCTTGAAGCTAACAATTGAAGACTATCCTTTTGCCAATGATGGCCTTGA
TCTCTGGGATGCCATAAAACAATGGGTTACCGATTATGTTAATCACTACT
ACCCTGATAAAAGCCTTGTAGAATCTGATGAAGAGCTCCAAGCTTGGTGG
A
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