DN621174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.615e-58 Identity = 107/168 (63.69%), Postives = 132/168 (78.57%), Query Frame = -3 Query: 184 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 669 KGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQ +EK + G LK Sbjct: 226 KGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.755e-58 Identity = 105/167 (62.87%), Postives = 128/167 (76.65%), Query Frame = -3 Query: 181 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLKA 669 KG+ GV+ RWGV +LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKKIY++G+A E + TEFD TEK I PMGGF HYG+V ++L++KGC GP+KR +TLR+S+ QT R ALE+I LKFIDTSSKFGHG Q ++K KY+G K+ Sbjct: 227 KGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 1.047e-57 Identity = 102/167 (61.08%), Postives = 135/167 (80.84%), Query Frame = -3 Query: 175 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLKA*F 666 G++GV +RW +LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++ + ++ TEFD T+K I PMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+I LK+IDTSSK GHGRFQ T EK + G+LK F Sbjct: 227 GFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.979e-57 Identity = 104/161 (64.60%), Postives = 127/161 (78.88%), Query Frame = -3 Query: 184 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 666 G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GK E+++A TEFDRT+K ITPMGGF HYG +N D++++KG G +KRVVTLR+SL TSR ALEE+ LK+IDT+SKFG GRFQ EK + G LK Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 220.705 bits (561), Expect = 6.787e-57 Identity = 106/168 (63.10%), Postives = 131/168 (77.98%), Query Frame = -3 Query: 184 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 669 KGY+GV +RW +LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQ +EK + G LK Sbjct: 226 KGYKGVTSRWHTKKLPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 220.705 bits (561), Expect = 6.787e-57 Identity = 103/168 (61.31%), Postives = 128/168 (76.19%), Query Frame = -3 Query: 184 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 669 +G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ ++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHGRFQ QEK + G K Sbjct: 226 RGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVKNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.368e-56 Identity = 104/161 (64.60%), Postives = 125/161 (77.64%), Query Frame = -3 Query: 184 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 666 G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KIY++GK E ++A T FDRT+K I PMGGF HYG+VN D++++KG G KKRVVTLR+SL TSR A+EE+ LK+IDT+SKFG GRFQ EK + G LK Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-TNFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 217.238 bits (552), Expect = 7.503e-56 Identity = 102/161 (63.35%), Postives = 124/161 (77.02%), Query Frame = -3 Query: 184 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 666 G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T FDRT+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ LK+IDT+SKFG GRFQ EK + G LK Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 217.238 bits (552), Expect = 7.503e-56 Identity = 101/168 (60.12%), Postives = 127/168 (75.60%), Query Frame = -3 Query: 184 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 669 +G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+ ++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A+E I+LKFIDT+SKFGHGRFQ QEK + G K Sbjct: 226 RGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of DN621174 vs. ExPASy Swiss-Prot
Match: RL3_DEBHA (60S ribosomal protein L3 OS=Debaryomyces hansenii GN=RPL3 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.848e-54 Identity = 102/161 (63.35%), Postives = 121/161 (75.16%), Query Frame = -3 Query: 184 GYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQRTQEKAKYYGRLK 666 G+EGV RWG +LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++G A ES S TEFDRT+K I PMGGF YG V D++L+KG G KKR+VT+R+SL TSR A E + LK+IDT+SKFG GRFQ EK + G LK Sbjct: 225 GFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGATEFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384 The following BLAST results are available for this feature:
BLAST of DN621174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621174 ID=DN621174; Name=DN621174; organism=Citrus sinensis; type=EST; length=755bpback to top |