DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.577e-51
Identity = 93/144 (64.58%), Postives = 112/144 (77.78%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T GQVI C+AAVAWE  K LVIE+V+VAPPQA EVRIKILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT+++ GDHV+P +  EC++C  CKS ++N+C  +R  T  GVM++D KSRFSI GKPIYHF+G
Sbjct:    3 NTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVG 146          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.577e-51
Identity = 91/144 (63.19%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T GQ+I C+AAVAWE  K LVIE+V+VAPPQAGEVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT ++PGDH +P +  EC EC  CKS ++N+C  +R  T  GVM+ND KSRFSI G+P++HF+G
Sbjct:    3 NTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVG 146          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.463e-50
Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M T G+VI CKAAVAWEP K L IE+V+VAPP A EVRIK+  T +CHTDAYT SG DPEGLFP ILGHE AG VESVGEGVT+ +PGD VIP Y  +C ECKFCK+ KTNLC K+R   G G ++ D+ SRF+  GK ++HFMG
Sbjct:    1 METAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.911e-50
Identity = 93/144 (64.58%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            ST GQVI CKAAVAW     L IE +QVAPP+A EVR+KIL+TA+CHTDAYT  G DPEGLFP +LGHE +GIVESVGEGVT   PGDHV+P Y  +C+EC++CK+ KTNLC K+R + G G  M D  SRF+ NGK ++HFMG
Sbjct:    3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNG-FMPDGSSRFTCNGKQLFHFMG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.560e-50
Identity = 92/145 (63.45%), Postives = 112/145 (77.24%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI CKAAVAWE  K L IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC++C  CKS ++NLC  +R     GVM+ D +SRF+INGKPI+HF+G
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 5.560e-50
Identity = 92/145 (63.45%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI CKAAVAWE  K L IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC+EC  CKS ++N+C  +R     GVM+ D KSRF+I GKPI+HF+G
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.560e-50
Identity = 92/145 (63.45%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI CKAAVAWE  K L IE+V+VAPPQA EVR+KIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC+EC  CKS ++N+C  +R     GVM+ D KSRF+I GKPI+HF+G
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 9.483e-50
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MS EG+ ITCKAAVAW   + L IED+QVAPP+A EVR+K+ ++A+CHTDAYT SG DPEG FP +LGHE AGIVES+GEGV  V+PGDHVI  Y  EC+ECKFC+SGKTNLC K+R   G G +M D  SRFS   K + H+MG
Sbjct:    1 MSFEGKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRG-LMPDGTSRFSCRDKTLLHYMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.239e-49
Identity = 93/144 (64.58%), Postives = 111/144 (77.08%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T GQVI CKAAVAWE  K L +E+V+VAPP+AGEVRIK++ T +CHTDAYT SG DPEG FP ILGHE AG+VESVGEGVT+ + GD VIP Y  +C ECKFCK+ KTNLC K+R   G G +M D  SRF+  GK ++HFMG
Sbjct:    1 ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRG-LMPDNTSRFTCKGKQLFHFMG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.618e-49
Identity = 90/144 (62.50%), Postives = 113/144 (78.47%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T GQVI CKAAVAWE  K LVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT+++PGDHV+P +  EC++C+ CKS ++N+C  +R  T  GVM++D ++RFS +GKPIYHF+G
Sbjct:    4 NTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVG 147          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADH_MALDO8.577e-5164.58Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PEA8.577e-5163.19Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADHX_SPAAU1.463e-5065.52Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_CAEEL1.911e-5064.58Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH3_HORVU5.560e-5063.45Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH2_ORYSJ5.560e-5063.45Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI5.560e-5063.45Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
FADH1_SCHPO9.483e-5064.14Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADHH_GADMO1.239e-4964.58Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADH1_PETHY1.618e-4962.50Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
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