DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.759e-49
Identity = 93/144 (64.58%), Postives = 112/144 (77.78%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T G+ I C+AAVAWE  K L +E+V+VAPPQAGEVRIKI+ T +CHTDAYT SG DPEG+FP +LGHE AGIVESVGEGVT+ + GD VIP Y  +C ECKFCK+ KTNLC K+R   G G+M N   SRFS NG+ ++HFMG
Sbjct:    1 ATVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNG-TSRFSCNGQVLFHFMG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.147e-49
Identity = 90/145 (62.07%), Postives = 111/145 (76.55%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI C+AAV WE  K L IE+V+VAPPQA EVRIKIL+TALCHTD Y W  K    +FP ILGHEA GIVESVGEGVT+V PGDHV+P +  EC+EC  CKS ++N+C  +R     GVM+ D KSRF+I+G+PI+HF+G
Sbjct:    1 MATAGKVIKCRAAVTWEAGKPLSIEEVEVAPPQAMEVRIKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECAHCKSEESNMCDLLRINVDRGVMIGDGKSRFTISGQPIFHFVG 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.049e-48
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MSTEGQ+I CKAAVAWE  K L IE+++V PP+A EVR+K+ FT +CHTDAYT SG D EG FP + GHE AG+VESVGEGV  V+ GD V+  Y  ECRECKFC SGKTNLCGK+R   G G ++ D  SRF   GK ++H+MG
Sbjct:    1 MSTEGQIIKCKAAVAWEAGKDLSIEEIEVLPPRAHEVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSVVLLYTPECRECKFCLSGKTNLCGKIRATQGKG-LLPDGTSRFRCKGKDLFHYMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.369e-48
Identity = 95/140 (67.86%), Postives = 108/140 (77.14%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            QVI CKAAVAWE  K L IE+++VAPPQA EVRIKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GKPI HFMG
Sbjct:    4 QVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKPILHFMG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.336e-48
Identity = 92/142 (64.79%), Postives = 109/142 (76.76%), Query Frame = 2
Query:  194 EGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +GQVI CKAAVAWE  K L +E+++VAPP+A EVR+K+L TA+CHTDAYT SG DPEG FP +LGHE AGIVESVGEGVT+ +PGD VIP Y  +C ECKFC + KTNLC K+R   G G MM D  SR +  GK +YHFMG
Sbjct:    4 DGQVIHCKAAVAWEAKKPLSLEEIEVAPPKAHEVRMKVLATAVCHTDAYTLSGVDPEGSFPVVLGHEGAGIVESVGEGVTKFKPGDSVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-MMPDGTSRLTCRGKSLYHFMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 3.984e-48
Identity = 94/143 (65.73%), Postives = 107/143 (74.83%), Query Frame = 2
Query:  191 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            T G++I CKAAVAW+P   L IE+VQV PP+  EVRIKI+ + +CHTDAYT SGKDPEGLFP ILGHE AGIVESVG  VT VQ GD VI  Y  EC+ CKFCKSGKTNLCG++R   G G +M D  SRFS NG  + HFMG
Sbjct:    6 TAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKG-LMPDGTSRFSCNGNTLLHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 8.876e-48
Identity = 93/140 (66.43%), Postives = 108/140 (77.14%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            QVI CKAAVAWE  K L IE+++VAPP+A EVRIKIL TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GK ++HFMG
Sbjct:    4 QVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKSVFHFMG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 92/139 (66.19%), Postives = 106/139 (76.26%), Query Frame = 2
Query:  203 VITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            VI CKAAVAWE  K L IE+++VAPP+A EVR+KI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+ +PGD VIP Y  +C ECKFC + KTNLC K+R   G GV M D  SRF+  GK + HFMG
Sbjct:    4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGV-MPDGTSRFTCKGKQVLHFMG 141          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.405e-47
Identity = 89/141 (63.12%), Postives = 107/141 (75.89%), Query Frame = 2
Query:  197 GQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            G+ I C AA+AWE  K L IE+V+VAPP++GEVRIKIL + +CHTDAYT  G DPEG+FP ILGHE AGIVES+GEGVT V+PGD VIP Y  +C ECKFC + KTNLC K+R   G GV M D  +RF+  GK ++HFMG
Sbjct:    5 GKPIKCMAAIAWEAKKPLSIEEVEVAPPKSGEVRIKILHSGVCHTDAYTLEGIDPEGIFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGV-MPDGTTRFTCKGKEVFHFMG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.514e-47
Identity = 88/145 (60.69%), Postives = 109/145 (75.17%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M+T G+VI CKAAVAWE  K L +E+V+ APPQA EVR KIL+TALCHTD Y W       +FP ILGHEA GIVESVGEGVTE+ PGDHV+P +  EC+EC  C S ++NLC  +R     GVM++D +SRF+I+GKPI+HF+G
Sbjct:    1 MATAGKVIKCKAAVAWEAGKPLSMEEVEDAPPQAMEVRDKILYTALCHTDVYFWEANGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKECAHCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLG 145          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADHL_GADMO2.759e-4964.58Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH2_MAIZE6.147e-4962.07Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
FADH_PICPA1.049e-4862.07S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADHX_RAT1.369e-4867.86Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MYXGL2.336e-4864.79Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
FADH2_SCHPO3.984e-4865.73Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADHX_MOUSE8.876e-4866.43Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_UROHA3.373e-4766.19Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_OCTVU4.405e-4763.12Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADH2_HORVU7.514e-4760.69Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
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