DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 185.652 bits (470), Expect = 1.674e-46
Identity = 91/140 (65.00%), Postives = 107/140 (76.43%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +VI CKAAVAWE  K L IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GK I H+MG
Sbjct:    4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKTILHYMG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.186e-46
Identity = 92/140 (65.71%), Postives = 107/140 (76.43%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            QVI CKAAVAWE  K L IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG +P ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GK I H+MG
Sbjct:    4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKTILHYMG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 4.871e-46
Identity = 91/140 (65.00%), Postives = 105/140 (75.00%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +VI CKAAVAWE  K L IE+++VAPP+A EVRIKI  TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT ++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GK I H+MG
Sbjct:    4 KVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKTILHYMG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.361e-46
Identity = 88/144 (61.11%), Postives = 105/144 (72.92%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T G+ I C AAVA++  K L +E++ V  P+A EVRIKI +TA+CHTDAYT SG DPEGLFPC+LGHE AGIVESVG+ V  V+PGDHVI  Y AEC +CKFC SGKTNLCG VR   G GVM +      +  G+ IYHFMG
Sbjct:    4 ATVGKPIKCIAAVAYDAKKPLSVEEITVDAPKAHEVRIKIEYTAVCHTDAYTLSGSDPEGLFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRATQGKGVMPDGTTRFHNAKGEDIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 8.308e-46
Identity = 90/140 (64.29%), Postives = 107/140 (76.43%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +VI CKAAVAWE  K + IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + +TNLC K+R   G G +M D  SRF+  GK I H+MG
Sbjct:    4 EVIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKG-LMPDGTSRFTCKGKTILHYMG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMG 137          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMG 137          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMG 137          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMG 137          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.123e-45
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +AAVA+ P K L I ++ VAPP+ GEV IK+  T +CHTDA+T SG DPEG+FP +LGHE AG+V  VGEGVT V+PGDHVIP Y AEC EC+FC+SGKTNLC  VR   G G +M D  +RFS NG+P+YH+MG
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKG-LMPDGTTRFSYNGQPLYHYMG 137          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADHX_HUMAN1.674e-4665.00Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_BOVIN2.186e-4665.71Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_RABIT4.871e-4665.00Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
FADH_YEAST6.361e-4661.11S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADHX_HORSE8.308e-4664.29Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
FRMA_SHISS4.123e-4562.22S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOUT4.123e-4562.22S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOSM4.123e-4562.22S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLI4.123e-4562.22S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC4.123e-4562.22S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
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