DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40
Identity = 77/147 (52.38%), Postives = 104/147 (70.75%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC---GKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +TEG+VI CKAA+AWE  K L +E+++V+PP+  EVR+KI+ T +C TD +  +    EG+FP ILGHE AGIVES+G+GV++ +PGD VIP Y  +C  CKFC + KTNLC    K++       +M+D  SRF+  GKPIYHFMG
Sbjct:    1 TTEGKVIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKVIPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.058e-40
Identity = 82/147 (55.78%), Postives = 104/147 (70.75%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF--SINGKPIYHFM 616
            M T+G+VITCKAAVAW   + LV+EDV+V PPQ  EVRI+ILFT++CHTD   W G+ + +  +P ILGHEAAGIVESVGEGV E+  GDHV+P +  EC +C+ CK    NLC + R      VM+ D K+RF  S + KPIYHF+
Sbjct:    1 METQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFL 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.381e-39
Identity = 79/148 (53.38%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV---MMNDRKSRFSINGKPIYHFMG 619
            MST+G+VI CKAA+AWE  K L IE+V+VAPP+A EVR++I+  ++C +D Y  +    EGL P ILGHE AGIVESVG GV   +PGD VIP Y   CR+CKFC+S  TN C K        +   +M+D+ SRF+  GK IYHF+G
Sbjct:    1 MSTKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQIIAASVCRSDTYVINPAFKEGLLPVILGHECAGIVESVGPGVNNFKPGDKVIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRFTCKGKSIYHFLG 148          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.738e-38
Identity = 74/138 (53.62%), Postives = 100/138 (72.46%), Query Frame = 2
Query:  200 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHF 613
            QVITC AAVAW   + LV+E+V+V+PPQ  E+RIK++ T+LC +D   W   + + L P I GHEAAGIVES+GEGVTE + GDHV+  +  EC  C+ C SGK+N+C +V G    G+M +D+K+RFSI GKP+YH+
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAW---ESQSLLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMC-QVLGMERKGLMHSDQKTRFSIKGKPVYHY 145          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38
Identity = 77/136 (56.62%), Postives = 96/136 (70.59%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPIYHFMG 619
            +AAVA E  K L + +V +  P+AGEV ++I  T +CHTD +T SG DPEGLFP ILGHE AG+V  VG GVT V+PG+HVIP Y  ECR+C  C SGKTNLC  +R   G G +M D  SRFS ++G PI+H+MG
Sbjct:    4 RAAVALEAGKPLEVMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGLFPSILGHEGAGVVVEVGPGVTSVKPGNHVIPLYTPECRQCASCLSGKTNLCTAIRATQGQG-LMPDGTSRFSMLDGTPIFHYMG 138          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38
Identity = 78/148 (52.70%), Postives = 103/148 (69.59%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG---ATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M T+G+VITCKAA+AW+ +  L IE+++V+PP+A EVRIK++ T +C TD    + K  + LFP +LGHE AGIVESVG GVT  +PGD VIP +  +C++CK C S  TNLCGK+R     T    +M DR SRF+   + IYHFMG
Sbjct:    1 MGTQGKVITCKAAIAWKTDSPLCIEEIEVSPPKAHEVRIKVIATCVCPTDINATNPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTSKERSIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.327e-38
Identity = 78/136 (57.35%), Postives = 95/136 (69.85%), Query Frame = 2
Query:  215 KAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPIYHFMG 619
            +AAVA E  K L I +V +  P+AGEV ++I  T +CHTD +T SG DPEG+FP ILGHE AG+V  VG GVT V+PGDHVIP Y  ECR+C  C S KTNLC  +RG  G G +M D  SRFS ++G PI H+MG
Sbjct:    4 RAAVAVEAGKPLEIMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGMFPAILGHEGAGVVVEVGPGVTSVKPGDHVIPLYTPECRQCPSCLSQKTNLCTAIRGTQGQG-LMPDGTSRFSMLDGTPILHYMG 138          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37
Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG---ATGAGVMMNDRKSRFSINGKPIYHFMG 619
            M T+G+VI CKAA+AW+    L IE+++V+PP+A EVRI+++ T +C TD      K  + LFP +LGHE AGIVESVG GVT  +PGD VIP +  +C+ CK C S  TNLCGK+R     T    +M DR SRF+  G+ IYHFMG
Sbjct:    1 MGTQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMG 147          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37
Identity = 81/145 (55.86%), Postives = 100/145 (68.97%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WEP K   IE+V+VAPP+A EVRIKIL T +C +D +  +G      FP ILGHEAAG+VESVGEGVT V+PGD VIP +  +C EC  C S K NLC K    + +G +M D  +RF+  GK I+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRIKILATGICRSDDHVITGALVRP-FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSACLSTKGNLCSKNDIGSASG-LMPDGTTRFTCKGKAIHHFIG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.164e-37
Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 2
Query:  191 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG-KDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI---------NGKPIYHFM 616
            T+G+VITCKAAV W P   LVI+++ V PPQ  EVR+KIL++++CHTD   W+G  + E  FP ILGHEA GIVESVGEGV +V+ GD+VIP +  EC ECK CK  ++NLC +        VM+ND  +RFS            +PIYHF+
Sbjct:    4 TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFL 155          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADH4_STRCA1.793e-4052.38Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADHL4_ARATH3.058e-4055.78Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHQ_RABIT3.381e-3953.38Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADHL6_ARATH3.738e-3853.62Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
FADH_PARDE4.882e-3856.62S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH4_RAT4.882e-3852.70Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADHI_RHOS48.327e-3857.35Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH4_MOUSE1.855e-3752.03Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_APTAU2.423e-3755.86Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADHL3_ARATH3.164e-3751.32Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
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