DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 4.133e-37
Identity = 76/144 (52.78%), Postives = 100/144 (69.44%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 616
            MST G+VI CKAAV WEP+K   IED++VAPP+A EVRIK++ T +C +D +  SG     L P +LGHE AGIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC + +  T     + D  SRFS  GKPI+HF+
Sbjct:    1 MSTAGKVIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPL-PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFI 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.133e-37
Identity = 78/146 (53.42%), Postives = 106/146 (72.60%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG-ATGAGVMMNDRKSRFSINGKPIYHFMG 619
            +T G+VI CKAAVAWE NK LVIE+++V  P A E+RIKI+ T +CHTD Y  + GK  +G FP +LGHE AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C  V+G A  +  +M+ +++RF+  G+ +  F+G
Sbjct:    1 ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG-FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQC--VKGWANESPDVMSPKETRFTCKGRKVLQFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.570e-36
Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV---MMNDRKSRFSINGKPIYHFMG 619
            M T+G+VI CKAA+AWE  K L IE+V+VAPP+A EVR++I    LC +D +  + K      P ILGHE AGIVESVG GVT V+PGD VIP Y   C++CKFC S  TN C K        +   +M D+ SRF+  GK IYHF G
Sbjct:    1 MGTKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFTCKGKSIYHFFG 148          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.679e-36
Identity = 80/144 (55.56%), Postives = 96/144 (66.67%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            ST G+VI CKAAV WEP K   IE+V+VAPP+A EVR+KI+ T +C +D +  SG      FP ILGHEAAG+VESVGEGVT V+PGD VIP +  +C EC  C S K NLC K      A  +M D  SRF+  GK I+HF G
Sbjct:    1 STAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMP-FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRK-NDIGPASALMPDGTSRFTCKGKAIHHFAG 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.794e-36
Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 616
            ST G+VI CKAA+AWE NK L IE ++VAPP+A EVRIKIL T +C +D +  SG     L P +LGHEAAG+VESVGEGVT V+PGD VIP +  +C +C+ C+S K NLC      +G+G +M D  SRF+  GK I+HF+
Sbjct:    1 STAGKVIKCKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSG-LMPDGTSRFTCKGKSIHHFI 141          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI C+AAV WE NK   IE+V+VAPP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCKHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI C+AAV WE NK   IE+V+VAPP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35
Identity = 78/150 (52.00%), Postives = 102/150 (68.00%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC-----GKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV W+ NK   IE+V+VAPP+A EVRIK++ T +C +D +  +G     L P ILGHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++N C     GK +G      M+ D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWQLNKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHAVTGSIAVPL-PVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKHPESNFCLINDLGKPKG------MLLDGTSRFTCKGKPIHHFIG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35
Identity = 79/145 (54.48%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CKS + N C K   +   G  + D   RF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGT-LQDGTRRFTCRGKPIHHFVG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35
Identity = 76/145 (52.41%), Postives = 98/145 (67.59%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI C+AAV WE NK   IE+V+V PP+A EVRIKI+ T +C +D +  +G     L P ILGHEA GIVES+GEGVT V+PGD VIP +  +C +C+ CK  ++NLC         G +M D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCRAAVLWEKNKPFSIEEVEVVPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLG 143          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADH1_RAT4.133e-3752.78Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1_GADCA4.133e-3753.42Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADHP_RABIT1.570e-3652.03Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH1_STRCA2.679e-3655.56Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_NAJNA7.794e-3655.24Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_GEOBU1.018e-3553.10Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADH1_GEOAT1.018e-3553.10Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_RABIT1.329e-3552.00Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1B_PAPHA1.736e-3554.48Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1_GEOKN2.962e-3552.41Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
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