DN621090

Overview
NameDN621090
Unique NameDN621090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35
Identity = 78/145 (53.79%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K       G  + D   RF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTRRFTCRGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.868e-35
Identity = 78/145 (53.79%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K       G  + D   RF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT-LQDGTRRFTCRGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35
Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 616
            ST G+VI CKAAV WEP K   I +++VAPP+A EVRIKIL + +C +D +  SG      FP ILGHEAAG+VESVGEGVT ++PGD VIP +  +C EC  C+  + N+C K       G ++ D  SRF+  GKP+YHF+
Sbjct:    1 STAGKVIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVN-FPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTG-LLYDGTSRFTYQGKPVYHFV 141          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 616
            M T G+VI CKAAV WE  +   IE+++VAPP+  EVRIKIL T +C TD +   G      FP I+GHEA GIVES+GEGVT V+PGD VIP +  +CREC  C++   NLC +    TG GV+  D  +RF+  GKP++HFM
Sbjct:    1 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR-SDITGRGVLA-DGTTRFTCKGKPVHHFM 141          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35
Identity = 72/143 (50.35%), Postives = 101/143 (70.63%), Query Frame = 2
Query:  188 STEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 616
            +T G+VI CKAAV W P + L IE+++VAPP+  EVR+KI+ T +C +D +  SG   +  FP ILGHEAAG+VESVGEGVT+ +PGD VIP +  +C EC+ CK+ ++NLC K       GV++ D+ SRF+  GK I++F+
Sbjct:    1 ATAGKVIKCKAAVCWGPKQPLSIEEIEVAPPKRHEVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKVIPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLL-DKTSRFTCKGKSIHNFI 142          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35
Identity = 78/145 (53.79%), Postives = 98/145 (67.59%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ ++N C K   +   G  + D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAQEVRIKMVAVGICGTDDHVVSGTMVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLAVPQCGKCRICKNPESNYCLKNDVSNPQGT-LQDGTSRFTCRGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35
Identity = 79/145 (54.48%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE  K   IEDV+VAPP+A EVRIK++   +C TD +  SG     L P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ + N C K   +   G  + D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWEVMKPFSIEDVEVAPPKAYEVRIKMVTVGICGTDDHVVSGTMVTPL-PVILGHEAAGIVESVGEGVTTVEPGDKVIPLALPQCGKCRICKTPERNYCLKNDVSNPRGT-LQDGTSRFTCRGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.125e-34
Identity = 77/145 (53.10%), Postives = 97/145 (66.90%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE  K   IE+V+VAPP+A EVRIK++ T +C +D +  SG     L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +   G  M D  SRF+  GKPI+HF+G
Sbjct:    1 MSTAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGT-MQDGTSRFTCRGKPIHHFLG 143          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.470e-34
Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 619
            MST G+VI CKAAV WE NK   +E+V+VAPP+A EVRIKI+ T +C +D +  +G      FP ILGHEAAG++ESVGE VT ++PGD VIP +  +C EC+ C S K NLC K   ++    +M D  +RF+  GK I+HF+G
Sbjct:    1 MSTVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVG 144          
BLAST of DN621090 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 2
Query:  185 MSTEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 616
            M T G+VI CKAAV W  N+   IE+++VAPP+A EVR+KIL T +C TD +   G      FP I+GHEA G+VESVGEGVT V+PGD VIP +  +CREC  C + + NLC +    TG GV+  D  +RF+  GKP+ HFM
Sbjct:    1 MGTAGKVIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKGS-MVSKFPVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNACLNPEGNLCIR-SDLTGCGVLA-DGTTRFTCKGKPVQHFM 141          
The following BLAST results are available for this feature:
BLAST of DN621090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ADH1B_PANTR2.962e-3553.79Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN3.868e-3553.79Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1B_UROHA5.052e-3551.75Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH7_HUMAN8.617e-3552.08Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH1_RANPE8.617e-3550.35Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1A_PONAB8.617e-3553.79Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH1A_MACMU8.617e-3554.48Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH1E_HORSE1.125e-3453.10Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADH1_CHICK1.470e-3451.72Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH7_MOUSE1.920e-3452.08Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621090 ID=DN621090; Name=DN621090; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTGGTGTGTTTGGTAGAATCAATAATAGAGGGAGCTACTTT
AGAAAAATCTCACCTCTGTTGCCGGCAGCCACTCTCAGATCGTGTCACGT
CCCTTTTGAATAATAATATCTATCTGCATCTACTCGTTTCTTTTTGTGGT
CTGTTTTTCATTCTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGGTC
AAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCATTG
GTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCGAAT
CAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAGCG
GCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTGCT
GGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAGGTTCAACCAGGTGA
TCATGTCATCCCTTGTTACCAGGCAGAATGCCGAGAGTGCAAGTTTTGCA
AGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTGCT
GGTGTCATGATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAGCC
TATCTATCACTTCATGGGAA
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