DN621086

Overview
NameDN621086
Unique NameDN621086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 3.641e-90
Identity = 154/177 (87.01%), Postives = 168/177 (94.92%), Query Frame = 2
Query:   47 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            ETFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEE+GAGDQG MFGYATDETPE MPL+H+LAT+LGA+LTE RKNGTC WLRPDGKTQVT+EY N
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLTHMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLN 180          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 6.867e-89
Identity = 155/178 (87.08%), Postives = 165/178 (92.70%), Query Frame = 2
Query:   44 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITT A V+YEKIVR TCR IGF+S DVGLDAD C VLV IEQQSPDIAQGVHGHL+K+PE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTE RKN TC WLRPDGKTQVTVEY N
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTSAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKN 178          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 6.867e-89
Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 2
Query:   44 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            METFLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFGEITT A V+YEKIVR TCR IGF+S DVGLDAD C VLV IEQQSPDIAQGVHGHL+K+PE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTE RKN TC WLRPDGKTQVTVEY N
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKN 178          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 1.171e-88
Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 2
Query:   44 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YE+IVR TCR IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDET E MP  HVLAT+LGAKLTE RKNGTC WLRP GKTQVTVEY N
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETLELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRN 178          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 2.609e-88
Identity = 154/177 (87.01%), Postives = 164/177 (92.66%), Query Frame = 2
Query:   47 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            ETFLFTSESVNEGHPDKLCDQ+SDA+LDACL QD DSKVACET TKTN+VMV GEITTKA V+YEKIVRDTCRNIGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPEE+GAGDQG MFGYATDETPE MPLSHVLAT+LGA+LTE RKNGTC W+RPDGKTQVTVEY N
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDADSKVACETVTKTNMVMVLGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWVRPDGKTQVTVEYLN 180          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 4.766e-82
Identity = 143/176 (81.25%), Postives = 157/176 (89.20%), Query Frame = 2
Query:   44 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEY 571
            +E+FL+TSESVNEGHPDK+CDQ+SDA+LDACLEQDPDSKVACETC KT +VMVFGEITTKA V+YE IVR  C+ IGF S+DVGLDAD CKVLV+IE+QSPDI QGVHG  +K  EEIGAGDQGHMFGYATDETPE MPL+HVLATQLG KLTE RKNG C WLRPDGKTQVTVEY
Sbjct:    4 LESFLYTSESVNEGHPDKICDQVSDAVLDACLEQDPDSKVACETCCKTGMVMVFGEITTKAKVDYEAIVRKVCKEIGFTSEDVGLDADKCKVLVHIEEQSPDIGQGVHGMGTKALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEVRKNGVCPWLRPDGKTQVTVEY 179          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 7.875e-77
Identity = 136/151 (90.07%), Postives = 143/151 (94.70%), Query Frame = 2
Query:  125 LDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            +DACLEQD DSKVACETCTKTNLVMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGH +K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTE RKNGTC WLRPDG TQVTVEYYN
Sbjct:    3 VDACLEQDSDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGNTQVTVEYYN 153          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 8.706e-76
Identity = 133/175 (76.00%), Postives = 151/175 (86.29%), Query Frame = 2
Query:   53 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            FLFTSESVNEGHPDKL DQISD ILDACLEQDPDSKVACET TKTN+VMVFGEITTKA V+YE +VR  CR++GF+S++ GLD +NC+VLV +  QSPDI QGVHG  +K  EEIGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LT  RK+GTC W+ PDGKTQVT+EY N
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLEQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISNETGLDGNNCRVLVELHDQSPDIGQGVHGMGTKSLEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYEN 177          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.137e-75
Identity = 132/145 (91.03%), Postives = 140/145 (96.55%), Query Frame = 2
Query:  143 QDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            QDPDSKVACETCTKTN+VMVFGEITTK N++YEKIVRDTCRNIGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTE RK+GTC WLRPDGKTQVT+EYYN
Sbjct:    1 QDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYN 145          
BLAST of DN621086 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 7.370e-75
Identity = 131/175 (74.86%), Postives = 149/175 (85.14%), Query Frame = 2
Query:   53 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEDRKNGTCTWLRPDGKTQVTVEYYN 577
            FLFTSESVNEGHPDKL DQISD ILDACL QDPDSKVACET TKTN+VMVFGEITTKA V+YE +VR  CR++GF+SD+ GLD + C+VLV +  QSPDI QGVHG  +K  E+IGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LT  RK+GTC W+ PDGKTQVT+EY N
Sbjct:    3 FLFTSESVNEGHPDKLADQISDGILDACLAQDPDSKVACETATKTNMVMVFGEITTKAKVDYEAVVRQVCRDVGFISDETGLDGNKCRVLVELHDQSPDIGQGVHGMGTKSDEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYEN 177          
The following BLAST results are available for this feature:
BLAST of DN621086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_HORVU3.641e-9087.01S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK4_BRAJU6.867e-8987.08S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_ARATH6.867e-8987.64S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK_PINBN1.171e-8887.64S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK3_HORVU2.609e-8887.01S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK_CHLRE4.766e-8281.25S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK1_PEA7.875e-7790.07S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK_OSTTA8.706e-7676.00S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK3_ACTCH1.137e-7591.03S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK_OSTLU7.370e-7574.86S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621086 ID=DN621086; Name=DN621086; organism=Citrus sinensis; type=EST; length=578bp
CTCAATTCTAGATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGA
CTTTTTTGTTCACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTC
TGTGATCAGATCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCC
AGATAGCAAGGTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGG
TTTTTGGAGAGATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTT
CGTGACACTTGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGA
TGCTGATAACTGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATA
TCGCCCAGGGCGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGT
GCTGGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGA
ATTTATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTA
CCGAGGATCGAAAGAATGGCACTTGCACTTGGTTGAGGCCTGATGGCAAG
ACACAAGTTACTGTTGAGTATTACAATG
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