FC922054

Overview
NameFC922054
Unique NameFC922054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_HAHCH (Iron-sulfur cluster insertion protein erpA OS=Hahella chejuensis (strain KCTC 2396) GN=erpA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  TD+AA++V+ L++      L L V     GC+G  Y  ++ +   + D +VE  GV++++D  +  +++G ++DF +    ++FV  NPN+   CGCG SF
Sbjct:   12 IIFTDNAAAKVKSLIEDEGNDELSLRVFVTGGGCSGFQYGFSFDEAVNEDDTIVEKDGVRLVVDSLSYQYLVGAEVDFREGLEGAQFVIKNPNASTTCGCGSSF 115          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_BUCCC (Iron-sulfur cluster insertion protein erpA OS=Buchnera aphidicola subsp. Cinara cedri GN=erpA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 34/107 (31.78%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  120 RQAVTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  + +T +A  +++ LL +++   LKL +     GC+G  Y         K D  +   G++I+IDP ++ +++G K+D++++   S+FV  NPN+K  CGCG SF
Sbjct:    3 KHQIKITINAIKKIKKLLLKKKNFKLKLRIFITGGGCSGFQYGFELEKITKKNDISIIQSGIEIIIDPISIQYLLGGKIDYIENLEGSKFVISNPNAKRTCGCGLSF 109          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_BLOPB (Iron-sulfur cluster insertion protein erpA OS=Blochmannia pennsylvanicus (strain BPEN) GN=erpA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQR---QRPYLKLGVK--ARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            + LTD AA +V+   +        +LKL V     GC+G  Y     D+ +  D +VE+ GV ++IDP +L ++ G  +D+ +    S FV INPN+K  C CG SF
Sbjct:    9 IQLTDFAARKVKFFTENEIINSNSHLKLRVYIIGGGCSGFQYRFILDDKISSDDCIVENNGVSLVIDPMSLQYLFGGIIDYYEGLEGSRFVVINPNAKNTCSCGSSF 115          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_PSEA6 (Iron-sulfur cluster insertion protein erpA OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=erpA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11
Identity = 32/104 (30.77%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGVKARG--CNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  +D+AA +V+ L+++ + P LKL V   G  C+G  Y   + ++    D  ++   V +++DP +L +++G ++D+ +    S F+  NPN+   CGCG SF
Sbjct:    9 IEFSDAAARKVKALVEEEENPNLKLRVYVTGGGCSGFQYGFTFDEKVNDGDTTIDKDQVTLVVDPMSLQYLLGGEVDYTEGLEGSRFLVNNPNATTTCGCGASF 112          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_PSEHT (Iron-sulfur cluster insertion protein erpA OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=erpA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGVKARG--CNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  TD+AA RV+ L+ + + P LKL V   G  C+G  Y   + ++    D  +   GV +++DP +L +++  ++D+ +    + F   NP++   CGCG SF
Sbjct:    7 IKFTDAAADRVKQLIDEEENPELKLRVYVTGGGCSGFQYGFTFDEKANPGDLEIVKNGVMLVVDPMSLQYLVDGEVDYTEGLEGARFFVTNPHATTTCGCGSSF 110          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: YNIU_RHOCA (Uncharacterized protein in nifU 5'region OS=Rhodobacter capsulatus PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPY--LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            + +T  A   ++  ++   +P   L+L V+A GC GL Y +    E    D  +    V +LIDP    H+ GTK+DFV +   + F F NPN+K  CGCG+SF
Sbjct:    2 IEITQPAQEAIKAAIEGAGQPVAGLRLMVQAGGCAGLKYGMALELEAQPDDASLTFGEVTVLIDPLTREHIEGTKIDFVSNLEGAGFTFDNPNAKSACGCGKSF 105          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_BLOFL (Iron-sulfur cluster insertion protein erpA OS=Blochmannia floridanus GN=erpA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11
Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGVKAR------GCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            + LT SAA +V+ L+  +     KL +K R      GC G  Y     D+ +  D ++E  G  +++DP +L ++ G  +D+ +    S+F+ +NPN+KG C CG SF
Sbjct:   11 IKLTHSAADQVKKLISSQDYAE-KLDLKLRVYILGGGCGGFQYKFILDDQVSNDDCVIESNGAIVVVDPMSLQYLFGGIIDYYEGLEGSKFLVVNPNAKGVCSCGSSF 117          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: YCF83_GALSU (Uncharacterized protein ycf83 OS=Galdieria sulphuraria GN=ycf83 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  129 VTLTDSAASRVRHL--LQQRQRPYLKLGVKARGCNGLSYTLNYADERAKFD-ELVED-KGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            + +T SA   +  +  L    + Y+++G+K  GC+GLSY + Y  +    D +LV D     ++ D K+++++ G  +D+    +   F F+NPN+K  CGCG+SF
Sbjct:    6 INITKSALDHLNSISKLNSEDKLYIRIGIKQGGCSGLSYFMTYEKKSNISDNDLVYDYDNFTLVCDNKSILYLYGISLDYSSSLIDGGFKFLNPNAKQTCGCGKSF 111          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_WIGBR (Iron-sulfur cluster insertion protein erpA OS=Wigglesworthia glossinidia brevipalpis GN=erpA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 3
Query:  135 LTDSAASRVRHLLQQRQRPYLK--LGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            LTD A +++++LL++ +    K  + +   GCNG  Y     ++  K D L+    V+I+ID  +L ++IG  +D+ ++ L S F  INPN+K  C CG SF
Sbjct:   11 LTDLAKNKIKNLLKEEKNKNKKFRIYISGGGCNGFQYNFILDEKINKEDHLILFLDVEIVIDSISLQYLIGGVVDYKEELLESCFFVINPNAKTTCSCGTSF 112          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_VIBVU (Iron-sulfur cluster insertion protein erpA OS=Vibrio vulnificus GN=erpA PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++ +D+AA     L+ + + P LKL V     GC+G  Y   + +   + D  +E+ GV +++DP +L ++IG  +D+ +    S F   NPN+   CGCG SF
Sbjct:    8 LSFSDAAARVKAMLIAEEENPALKLRVYITGGGCSGFQYGFTFDESVNEGDTTIENSGVTLVVDPMSLQYLIGGVVDYTEGLEGSRFFVNNPNATTTCGCGASF 111          
The following BLAST results are available for this feature:
BLAST of FC922054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
ERPA_HAHCH1.864e-1131.73Iron-sulfur cluster insertion protein erpA OS=Hahe... [more]
ERPA_BUCCC1.864e-1131.78Iron-sulfur cluster insertion protein erpA OS=Buch... [more]
ERPA_BLOPB1.864e-1136.45Iron-sulfur cluster insertion protein erpA OS=Bloc... [more]
ERPA_PSEA63.180e-1130.77Iron-sulfur cluster insertion protein erpA OS=Pseu... [more]
ERPA_PSEHT4.153e-1130.77Iron-sulfur cluster insertion protein erpA OS=Pseu... [more]
YNIU_RHOCA5.424e-1136.54Uncharacterized protein in nifU 5'region OS=Rhodob... [more]
ERPA_BLOFL5.424e-1133.33Iron-sulfur cluster insertion protein erpA OS=Bloc... [more]
YCF83_GALSU9.252e-1132.08Uncharacterized protein ycf83 OS=Galdieria sulphur... [more]
ERPA_WIGBR9.252e-1135.29Iron-sulfur cluster insertion protein erpA OS=Wigg... [more]
ERPA_VIBVU9.252e-1132.69Iron-sulfur cluster insertion protein erpA OS=Vibr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922054 ID=FC922054; Name=FC922054; organism=Citrus sinensis; type=EST; length=740bp
AATTTTCTTTTTTTGAAAAAAAAGGAAATTAAATAGAAAAAGATTGCGTG
ACATTTTGGATATGATCGATGGCTTCGTTTCTGGCGCAAGCCGCTGAGAA
AATCGGACCGGCCGTTAGGCGGCAGGCCGTGACGTTAACAGACTCCGCCG
CATCTAGAGTACGTCACCTCCTCCAGCAACGCCAGCGACCTTACCTCAAG
CTCGGCGTCAAGGCCCGTGGCTGCAACGGCTTGTCCTACACCCTCAATTA
CGCCGATGAGAGAGCTAAGTTTGATGAGTTGGTTGAGGATAAGGGTGTGA
AGATACTGATTGATCCAAAAGCTCTCATGCACGTTATTGGGACCAAAATG
GATTTTGTAGATGATAAGCTCAGGTCTGAGTTTGTATTCATTAATCCAAA
CTCTAAAGGGCAGTGTGGTTGTGGTGAATCCTTTATGACAACCAGCAGTA
GTGGAGCGTCTAAGCAGGGTGGAAGCTAGGGATTCTTACAAACTAATAGT
ACATGAAGAATGAACGTAGATGATTCTTTTCCCTGGCTGGCCAAGCATTA
CGCACTTGTCTGAAGGTTGTGAATGAAAGGTAGACATCCTCGGTGAGCTT
TAATGGCAGTTGGAGCAACAGGGGCTTTACTAATTCACGTCCTGGGAATC
ATTGCTGTTTTGCCGTCTACAAACAAATTTGTAAAACTATTGTAGCATTT
TTTTTCCTGGTTTTGACAAAAATACCTTTGTAACCTGATT
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