DN621035

Overview
NameDN621035
Unique NameDN621035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = -2
Query:  411 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS--PDGVVDMSERPGLSSPRAQDLVCVP 716
            N+WSMGR+P  W+ P    PERF   S    D  G  ++ +PFG GRR CPGL+  +  +   LA ++  FD+K+        +DMSE  GL+     +L+ VP
Sbjct:  391 NVWSMGRNPLYWEKPDTFWPERFDQVSK---DFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGILKNNLLLVP 491          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13
Identity = 32/73 (43.84%), Postives = 53/73 (72.60%), Query Frame = -2
Query:  498 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDF 716
            N++++ RDPK+W NP E  P+RF    +S ID +GL+++LLPFG+GRR CPG+++ +  +  AL +++  FD+
Sbjct:  394 NVYAIARDPKLWTNPDEFNPDRFL---DSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDW 463          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = -2
Query:  408 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGV----VDMSERPGLSSPRAQDLVCVPV 716
            N+W++   P IWK+P    PERF    +++ D +GL+++LLPFG+GRR CPG+ + +  +   L +++  FD+K+  P+G+    + + E  GL   +   L  +PV
Sbjct:  390 NMWAVHMSPSIWKDPETFNPERFI---DNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKL--PNGMKAEELSIEENYGLICVKKLPLEAIPV 491          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = -2
Query:  390 NLWSMGRDPKIWKNPLESQPERFFSQS-NSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTS----PDGVVDMSERPGLSSPRAQDLVCVP-VARCAPS 716
            N W++ RDP  W    E  PERF  Q  ++E+D+ G   + +PFG GRR C G + A+  +   LA++I  FD+++ +        VDMS++ G++  R Q L  VP + +C  S
Sbjct:  420 NAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVPRIPKCVSS 534          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 32/73 (43.84%), Postives = 51/73 (69.86%), Query Frame = -2
Query:  498 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDF 716
            N +++ RDPK+W NP E  P+RF    +S ID RGL+++LLPFG+GRR CPG+++ +  +   L +++  FD+
Sbjct:  394 NAYAIARDPKLWTNPDEFNPDRFL---DSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDW 463          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = -2
Query:  450 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 716
            N W +  +P  WK P E +PERFF +  S ++  G  ++ +PFG GRR CPG+ LA+  L   +  M+Q F+         VD SE+ G
Sbjct:  399 NAWWLANNPNSWKKPEEFRPERFFEEE-SHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGG 486          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = -2
Query:  423 NLWSMGRDPKIWKNPLESQPERFFSQ-SNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPGLSSPRAQDL 716
            N W++ RDP +WK+PLE  PERF +   ++E  + G   +L PFG+GRR CPG +L    +   +AS++  F++ V S +  VD++E   LSS  A  L
Sbjct:  417 NTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW-VPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = -2
Query:  450 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 716
            N W +  +P  WK P E +PERFF +  S ++  G  ++ LPFG GRR CPG+ LA+  L   L  ++Q F+         +D SE+ G
Sbjct:  399 NAWWLANNPAHWKKPEEFRPERFFEEE-SHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGG 486          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = -2
Query:  408 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVD--MSERPGLSSPRAQDLVCVPV 716
            N +++GRDP  W NP E  PERF    +S ID +G H++LLPFG GRR CPG++  M  +   L +++  FD+ +     + D  M E       +   L  VPV
Sbjct:  395 NTYAIGRDPNCWTNPNEFIPERFV---DSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPLELVPV 496          
BLAST of DN621035 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = -2
Query:  450 NLWSMGRDPKIWKNPLESQPERFFSQSNSEIDVRGLHYQLLPFGTGRRGCPGLSLAMQELPTALASMIQCFDFKVTSPDGVVDMSERPG 716
            N W +  +P  WKNP E +PERF  +  ++++  G  ++ LPFG GRR CPG+ LA+  L   L  ++Q F+         +D SE+ G
Sbjct:  399 NAWWLANNPAHWKNPEEFRPERFLEEE-AKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGG 486          
The following BLAST results are available for this feature:
BLAST of DN621035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
C71DF_MENPI9.286e-1338.46Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BT_ARATH9.286e-1343.84Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.213e-1234.58Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71C1_MAIZE1.584e-1235.65Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71BS_ARATH1.584e-1243.84Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
TCMO_ARATH2.702e-1238.20Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C78A3_SOYBN2.702e-1240.40Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
TCMO_PHAAU3.529e-1238.20Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C71BL_ARATH3.529e-1238.10Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM6.019e-1237.08Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06C13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621035 ID=DN621035; Name=DN621035; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTTTTTTTTTTTTAGGTCCAAAATTGAATTCATCTGTTTAGGTGTC
CATAATGTCAAACACGTTGAGGAAAATTTTAGATTTTCCGTTGAAATTTC
AACGATCACTAATCGTTGATCTTGAAGTCATGCAAAGTATCATAGTCTTT
TGAGTTTCAACCTAAGACGTGGCCATATTGTGGACCATAAGAAATTTTCA
AAGATCACCATGTCGCTACATTGTTCAAGTTCTTGAATTTCAACGAAAGA
TGTAGAATTTTCTTCTACGTGCGACAGCGACACCTTACTGTCCAACCACT
TTGAGTTGAGTTAACCACACATTAAACAGAGACACTGACTGAACACTGCT
AAAGACACTTTAATTTCAACGTACATCCGAATTTACGATACTAGGAGCAC
AACGTGCAACTGGCACGCACACAAGATCCTGTGCTCTTGGAGATGATAAT
CCTGGGCGTTCAGACATATCAACCACACCATCGGGACTCGTTACTTTGAA
ATCGAAACACTGAATCATAGATGCTAGAGCTGTCGGCAACTCTTGCATGG
CTAAAGAAAGGCCAGGGCAGCCTCTTCTCCCAGTGCCAAATGGCAGCAAT
TGGTAATGCAATCCCCTAACATCAATCTCACTATTTGACTGTGAGAAGAA
TCGTTCTGGCTGAGATTCCAACGGGTTCTTCCAAATTTTGGGGTCCCTAC
CCATGGACCAAAGGTTC
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