DN621028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = -2 Query: 109 VAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAI-----GG---PGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF------------MSLFIDGK 618 V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV++ ++TGA +D + + +A + V +G ++KIG V++ GG GG+P+ Q D+V EV L+++A A ++ + D+L L L ++E V+GEE +++FI GK Sbjct: 615 VEKLSILPRSGGALGFTYIPPTHE--DRYLLFIDELHGRLVTLLGGRAAEEVVYSGR-ISTGALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGH--------LVDLVQREVTNLLQSALDVALTVVRANPDVLEGLGAQLEDEEKVEGEELQKWLNRVVPSEELAVFIKGK 794
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 55/180 (30.56%), Postives = 90/180 (50.00%), Query Frame = -2 Query: 136 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMV-----ERFGFS---KKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTR--------AKQIITTHIDILHKLAQLLIEKETVDGEE 627 +D A ++P G+ ++ F P E+ ++ G + Y++ QM VA GGR AE V+FG +NVT G +D +++++AR+MV R G + KKIG+V + NP G+ + + D+ + EV EL TR A + + IL + + L+EK + G E Sbjct: 783 FDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFG-DNVTDGGKDDLEKITKIAREMVISPQSARLGLTQLVKKIGMVDL---PDNPD-GELIKYRWDHPHVMPAEMSVEVSELFTRELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGLE 957
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 59/193 (30.57%), Postives = 94/193 (48.70%), Query Frame = -2 Query: 103 VAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAI-----GG---PGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF------------MSLFIDGKAE 618 V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV+ V+TGA +D + + +A + V +G +++IG +++ GG GG+P+ Q D+V EV+ L+++A A ++ + +L L L E E V+GEE ++ FI GK E Sbjct: 632 VEKLSILPRSGGALGFTYTPPTTE--DRYLLFVDELRGRLVTLLGGRAAEEVVLSGR-VSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGSPWGRDQGH--------LVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSVVAPKELTSFIRGKQE 813 The following BLAST results are available for this feature:
BLAST of DN621028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621028 ID=DN621028; Name=DN621028; organism=Citrus sinensis; type=EST; length=628bpback to top |