DN621027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23 Identity = 64/166 (38.55%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 32 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529 PV K +I+PRG A G+ P ++ SR + ++ V +GGRVAEE+IFG+ VT+GAS+DF Q + VAR MV ++G SK++G V+ G+ MS++ T +++ EV+ VE AY AK I+ H LH LA L+E ET+ G + ++ Sbjct: 505 PVHKATIVPRGMALGMVAQLPDKDETS---VSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMVTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEKEVKCFVENAYNNAKNILIKHNKELHALANALLEHETLTGAQIKNI 657
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.758e-23 Identity = 63/176 (35.80%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529 + G + DP+ K+SIIPRG+ G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++ A + +FG ++K+G ++ P M +K YS ATA ++D EVR L+ AY R ++T + K+A LL+EKE +D + + L Sbjct: 579 VAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQL 743
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.758e-23 Identity = 63/176 (35.80%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529 + G + DP+ K+SIIPRG+ G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++ A + +FG ++K+G ++ P M +K YS ATA ++D EVR L+ AY R ++T + K+A LL+EKE +D + + L Sbjct: 580 VAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 744
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.093e-22 Identity = 61/171 (35.67%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 32 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 544 P+ K +I+PRG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF +++A++MV +FG S+K+G++ G S T ++ E+R L+ +Y RAK I+ TH LA+ L+ ET+D +E + + ++GK Sbjct: 557 PINKATIMPRGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.093e-22 Identity = 61/171 (35.67%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 32 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 544 P+ K +I+PRG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF +++A++MV +FG S+K+G++ G S T ++ E+R L+ +Y RAK I+ TH LA+ L+ ET+D +E + + ++GK Sbjct: 615 PINKATIMPRGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.093e-22 Identity = 61/166 (36.75%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 32 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529 PV K +I+PRG+ G+ P ++ +SR + + V++ GRVAEE+IFG+ VT+GAS+DF +++AR MV ++G SK++G V+ G+ MS++ T +++ EV+ L+E AY AK I+T H H LAQ L+E ET+ G + + Sbjct: 498 PVHKATIVPRGRTLGMVSQLPEKDETS---FSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSKQLGFVSYNYEDD----GKSMSTE------TRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLAQALLEHETLTGAQIKKI 650
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.436e-22 Identity = 61/171 (35.67%), Postives = 97/171 (56.73%), Query Frame = 2 Query: 32 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 544 P+ K +I+PRG G P +R R+ L QM V++GGRVAEE+IFG +++TTGAS+DF +++A++MV +FG S+K+G++ G S T ++ E+R L+ +Y RAK I+ TH LA+ L+ ET+D +E + + ++GK Sbjct: 557 PINKATIMPRGPTLGHVSLLPENDRWNE---IRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.256e-22 Identity = 61/176 (34.66%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 529 LV L + P+ K++IIPRG+AGGLT F ++ +R+ L Q+ V +GGRV EE++FG + VT GA++DF + + +A+ MV+RFGFS KIG I + + AT D++D EV +L+ + TR + ++++ LA+ L+ ET+ +E +++ Sbjct: 431 LVALLTADSIPLHKVTIIPRGEAGGLTSFLQEKD---ISFMTRAQLLAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD-----------TQDEQLGEATRDLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAV 592
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.256e-22 Identity = 68/168 (40.48%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETV 505 LVG + D V KI+IIPRGQAGG T P L L +S L +A A+GGR AEE I+G +TTGAS+DF + + +AR MV + G SK +G P G S+ K YS TA +D E+ ++E Y +AK II ++ L L + L+ ET+ Sbjct: 499 LVGLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDLN--LKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMSK------LGQVQYVPSQGTLPSNVKLYSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETI 658
BLAST of DN621027 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.062e-21 Identity = 62/176 (35.23%), Postives = 101/176 (57.39%), Query Frame = 2 Query: 2 LVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQ----KDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 517 LV + P+ K++IIPRGQ+ G T P ++ + +++ + + V +GGRVAEE+IFG++ VTTGA++D + +++A QMV+ FG S K+GL F Q S D + TA+++DAE+ +++ +Y RAK I+ T LA+ L+E ET+ +E Sbjct: 468 LVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQ---LTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGL--------RDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADE 632 The following BLAST results are available for this feature:
BLAST of DN621027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621027 ID=DN621027; Name=DN621027; organism=Citrus sinensis; type=EST; length=651bpback to top |