DN621025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_ACHLA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23 Identity = 60/170 (35.29%), Postives = 95/170 (55.88%), Query Frame = -2 Query: 223 RNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTK-YRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEK-TEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQ 726 +NN WAIST + + S+ + KG A+GI I+VDGND LA+Y A + A + A P L+EA TYR+G H+TSDD YRT +E W ++ I RF+ ++ +G+WSE+E+ +L + ++ + E + E+F Y L EQ ++ K+ ++ Sbjct: 174 QNNQWAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTTSDDPCSIYRTKEEENEW-AKKDQIARFKTYLINKGYWSEEEDKKLEEEVLAEINDTFKKVESYGANVELIEIFEHTYAEMTPQLKEQYEEHKKYLE 342
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODBA_PSEPU (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida GN=bkdA1 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19 Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = -2 Query: 238 NNGWAIST-NISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEK------TEKPAITELFSDVYDVPPSNLAEQEKQL 723 NN WAIST S +G GI S+RVDGND +AVY A + A E A P L+E +TYR G HSTSDD +KYR D+ ++ PI R + + + G WSE+E + + ++ A + AE+ P+ +F DVY P +L Q ++L Sbjct: 241 NNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPL-GDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHLRRQRQEL 408
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODBA_PSEAE (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas aeruginosa GN=bkdA1 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.169e-18 Identity = 63/170 (37.06%), Postives = 86/170 (50.59%), Query Frame = -2 Query: 238 NNGWAISTNISEQFRSDGIVVKGRAYG--IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEK------TEKPAITELFSDVYDVPPSNLAEQEKQL 723 NN WAIST +G R G I S+RVDGND LAVY A + A E A P L+E +TYR G HSTSDD +KYR D+ + PI R + + G WSE++ +++ ++L A + AE P+ +F DVY P +L Q ++L Sbjct: 241 NNQWAIST-FQAIAGGEGTTFANRGVGCGIASLRVDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWTNFPL-GDPIARLKRHMIGLGIWSEEQHEATHKALEAEVLAAQKQAESHGTLIDGRVPSAASMFEDVYAELPEHLRRQRQEL 408
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_MYCPN (Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma pneumoniae GN=pdhA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = -2 Query: 232 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 723 NN +AIST + + K A I IRVDGND +A Y A+ A A S PVL+E ++R G H+TSDD + YRT +E E + P+ R RN++ +G + Q+E E+ + I++++ A +V + E+F Y+ +LA Q+ + K+ Sbjct: 192 NNQFAISTRTKLESAVSDLSTKAIAVNIPRIRVDGNDLIASYEAMHEAANYARSGNGPVLIEFFSWRQGPHTTSDDPSIYRTKEE-EAEAMKSDPVKRLRNFLFDRGILTPQQEEEMVAKIEQEVQAAYEVMVSKTPVTLDEVFDYNYEKLTPDLARQKAEAKK 354
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_MYCGE (Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma genitalium GN=pdhA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17 Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = -2 Query: 208 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTYPQD 723 NN +AIST + + VK A GI +RVDGND +A Y A+Q A A PVL+E +YR G H+TSDD + YRT E E + P+ R RN++ + ++ +E E+ S I++++ A + ++ E+F Y L EQ K+I + Y +D Sbjct: 192 NNQFAISTRTKLESAVSDLSVKAIACGIPRVRVDGNDLIASYEAMQDAANYARGGNGPVLIEFFSYRQGPHTTSDDPSIYRTKQE-EEEGMKSDPVKRLRNFLFDRSILNQAQEEEMFSKIEQEIQAAYEKMVLDTPVSVDEVFDYNYQELTPELVEQ----KQIAKKYFKD 358
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_RHIME (Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium meliloti GN=pdhA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 46/147 (31.29%), Postives = 81/147 (55.10%), Query Frame = -2 Query: 283 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDV 723 NN +A+ T++S +G ++GI +VDG D AV A A E S K P+++E LTYR HS SD + KYR+ DE++ ++E PI + + + +GW +E E ++ ++ + + A+ +P ++EL++D+ Sbjct: 201 NNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDPA-KYRSKDEVQKMRSEHDPIEQVKARLTDKGWATEDELKQIDKEVRDIVADSADFAQSDPEPDVSELYTDI 346
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPT_ASCSU (Pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = -2 Query: 217 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTY 723 NNG+ + T+ + S +G + VDG D LAV A++ +E + K P+++E TYR G HS SD T YRT +EI+ + R PI F++ + G +E E E+ I+K++ A++ A ++ + L +D+Y P+ + +++Q Y Sbjct: 215 NNGYGMGTSAARSSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHTDKEAPVEMLLTDIYYNTPAQYVRCTTE--DVLQQY 379
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_ASCSU (Pyruvate dehydrogenase E1 component subunit alpha type I, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15 Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = -2 Query: 217 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTY 723 NNG+ + T + S +G + I VDG D LAV AV+ A+E + K P+++E TYR HS SD T YRT +E++ + R PI F++ + G +E E E+ ++K++ A++ A ++ + + +D+Y P+ E++Q Y Sbjct: 220 NNGYGMGTAAARSSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKEIDKQVRKEIDAAVKQAHTDKESPVELMLTDIYYNTPAQYVRCTTD--EVLQKY 384
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_RICBR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=pdhA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 44/148 (29.73%), Postives = 82/148 (55.41%), Query Frame = -2 Query: 280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 723 NN +++ T+++ + KG ++GI+ +++G D +Y V+ A E P+++E TYR HS SD + KYR+ +E+E +K ER PI R + + SE + E+ S+K+ + +A++ +E + P EL++ +Y Sbjct: 180 NNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHSMSDPA-KYRSKEEVETYK-ERDPITEIRKIILENNYASEADLKEIEQSVKEIVKEAVEFSENSPLPNEEELYTQIY 325
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_CAEEL (Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = -2 Query: 187 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTYPQDYPTDVPV 723 NNG+ + T S +G + I VDG D LAV A + A+E S K P+++E TYR HS SD T YRT +EI+ + R PI F++ + +E+E + ++K++ +A+++A L++D+Y P+ QE + I +T Q + T V Sbjct: 218 NNGFGMGTTAERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALYADIYHNTPA----QEIRGATIDETIVQPFKTSADV 390 The following BLAST results are available for this feature:
BLAST of DN621025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621025 ID=DN621025; Name=DN621025; organism=Citrus sinensis; type=EST; length=727bpback to top |