DN621025

Overview
NameDN621025
Unique NameDN621025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA1_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At1g59900 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = -2
Query:  280 IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 642
            +  ++VDG DA AV  A + A++ A+ EK P+++E  TYR   HS SD  + YRT DEI   + ER PI R +  V      +E+E  ++   I+K++  AI  A+    P  +ELF++VY
Sbjct:  249 VPGLKVDGMDAFAVKQACKFAKQHAL-EKGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPMPEPSELFTNVY 368          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_RICFE (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia felis GN=pdhA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 43/148 (29.05%), Postives = 82/148 (55.41%), Query Frame = -2
Query:  280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 723
            NN +++ T+++       +  KG ++GI+  ++DG D   +Y   + A E       P+++E  TYR   HS SD + KYR+ +E+E +K ER P+   R  +    + +E +  E+  S+K+ + +A++ +E +  P   EL+++VY
Sbjct:  180 NNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGHSMSDPA-KYRSKEEVEQYK-ERDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVKFSENSPLPDEGELYTEVY 325          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_PEA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = -2
Query:  280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 723
            NN + + T      +S     +G    +  ++VDG DALAV  A + A+E A+ +  P+++E  TYR   HS SD  + YRT DEI   + ER PI R R  +      +E+E  +    ++K++ +AI  A+ +  P  ++LFS+VY
Sbjct:  232 NNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHAL-KNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKDSPMPDPSDLFSNVY 376          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = -2
Query:  280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 723
            NN +AIS    +Q   + I  +   YG+  + V+GND L VY AV+ ARE A   + P L+E ++YR+  HS+ DD + YR  +E+E  K +  P+  ++ +++  G  S++ E  +   I   + +A   AE     A       VY
Sbjct:  182 NNKYAISVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLTPHSSDDDDSSYRGREEVEEAK-KSDPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVNEATDEAENAPYAAPESALDYVY 328          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA2_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = -2
Query:  235 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY--DVPPSNLAEQEKQLK 723
            NN + + T      +S     +G    +  ++VDG DALAV  A + A+E A+ +  P+++E  TYR   HS SD  + YRT DEI   +  R PI R R  +      +E+E  ++   I+K++  A+  A+++  P  +ELF+++Y  D    +     K+LK
Sbjct:  228 NNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHAL-KNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESPIPDASELFTNMYVKDCGVESFGADRKELK 389          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 42/148 (28.38%), Postives = 80/148 (54.05%), Query Frame = -2
Query:  280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 723
            NN +++ T++S       +  KG ++GIR  ++DG D   +Y   +   E       PV++E  TYR   HS SD + KYR+ +E+  +K ER  + R R  +    + +E++   +  S+++ +  A++ +E +  P+  EL++D+Y
Sbjct:  180 NNEYSMGTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVAKYK-ERDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSENSPLPSEDELYTDIY 325          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 42/148 (28.38%), Postives = 80/148 (54.05%), Query Frame = -2
Query:  280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 723
            NN +++ T+++       +  KG ++GIR  ++DG D   +Y   +   E       PV++E  TYR   HS SD + KYR+ +E+E +K ER  + R R  +    + +E +   +  S+++ +  A++ +E +  PA  EL++++Y
Sbjct:  180 NNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVEKYK-ERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPLPAEDELYTEIY 325          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_YEAST (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=PDA1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = -2
Query:  280 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKP--AITELFSDVY 723
            NN + + T  S          +G+   I  ++V+G D LAVY A + A++  +S K P+++E  TYR G HS SD  T YRT DEI++ +++  PI   +  +   G  +E E      S +K + + +++A+    P   ++ LF DVY
Sbjct:  244 NNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSARKYVDEQVELADAAPPPEAKLSILFEDVY 391          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_PORPU (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra purpurea GN=pdhA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = -2
Query:  295 NNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITEL 723
            NN WAI            I  K  A+G+  I VDG D LAV    + A E A   + P L+EALTYR   HS +D   + R+  E E W   R PI + +  +      S  E  +++SS+K  L Q+++ A  + +P I+EL
Sbjct:  196 NNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHSLADPD-ELRSRQEKEAW-VARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEFAMSSPEPNISEL 336          
BLAST of DN621025 vs. ExPASy Swiss-Prot
Match: ODPA_KLULA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Kluyveromyces lactis GN=PDA1 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = -2
Query:  232 RAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKP--AITELFSDVYDVPPSNLAEQEKQLKE 654
            R   I  ++V+G D LAVY A + A++  +S   P+++E  TYR G HS SD  T YRT DEI++ +++  PI   +  +   G  +E E      + +K + + +++A+    P   ++ LF DVY VP S       +L+E
Sbjct:  257 RGQYIPGLKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVY-VPGSETPTLRGRLQE 398          
The following BLAST results are available for this feature:
BLAST of DN621025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ODPA1_ARATH2.282e-1438.02Pyruvate dehydrogenase E1 component subunit alpha-... [more]
ODPA_RICFE5.083e-1429.05Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_PEA5.083e-1433.78Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODBA_BACSU5.083e-1431.762-oxoisovalerate dehydrogenase subunit alpha OS=Ba... [more]
ODPA2_ARATH1.132e-1331.52Pyruvate dehydrogenase E1 component subunit alpha-... [more]
ODPA_RICTY1.931e-1328.38Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_RICPR2.523e-1328.38Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_YEAST3.295e-1332.00Pyruvate dehydrogenase E1 component subunit alpha,... [more]
ODPA_PORPU3.295e-1334.97Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_KLULA3.295e-1332.87Pyruvate dehydrogenase E1 component subunit alpha,... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06C07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621025 ID=DN621025; Name=DN621025; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTACTATAATTACGTATAGATTGCTTTATTACTATC
AAAATGTACATAGCATGTAGAAACTTACTGACGCTACATTTTTCATTTAT
ATGGAGTTTTCAGGAGTTTTATTTTTTATCTTTCCTTTTCCCCCCTTTAT
TCTACACATTTTATTGAAGTAGCCACGTGAAATCTATACAGGAACATCAG
TGGGATAGTCTTGTGGATATGTTTGAATAATTTCTTTCAGCTGTTTCTCT
TGCTCAGCAAGGTTTGATGGGGGAACATCATATACATCGGAGAACAGTTC
TGTAATCGCCGGCTTTTCTGTTTTCTCTGCAACTTGAATTGCTTGCAACA
ACTGTTTCTTGATGCTACTTCGAAGCTCGGTTTCTTCTTGCTCACTCCAC
CAGCCTTGCCTTTCCACCCAATTCCTAAATCTATTGATAGGACTTCGTTC
TGTTTTCCAGTACTCGATTTCATCAAGTGTTCGGTATTTGGTGGAATCAT
CTGAGGTTGAGTGATGTCCTACTCGATATGTAAGGGCCTCTACTAACACA
GGTCTCTTTTCACTGATAGCCATTTCACGAGCTGCCTGAACTGCAGTATA
AACAGCAAGTGCATCATTTCCATCTACTCGTATGCTTCGGATGCCATATG
CACGACCCTTAACAACAATACCATCGCTTCGAAATTGTTCTGATATATTG
GTACTAATGGCCCAGCCATTGTTGCGA
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