DN621024

Overview
NameDN621024
Unique NameDN621024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN621024 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = -3 
Query:  479 PGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 676
            PG  ++ ++ +ED +V  T  V PG++ TGM VA ++G PRMGPTFGAM++SG++ A   L  LG+
Sbjct:  227 PGHDSMWVSRSEDQVVEHTGVVHPGVVATGMAVATVEGLPRMGPTFGAMLLSGKRGAQACLNELGR 292
[Close]
BLAST of DN621024 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = -3 
Query:  482 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 646
            +ED +V  T EV PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L  + LG
Sbjct:  203 SEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 257
The following BLAST results are available for this feature:
BLAST of DN621024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
THI4_HALWD2.734e-1146.97Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_AERPE3.570e-1158.18Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06C06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621024 ID=DN621024; Name=DN621024; organism=Citrus sinensis; type=EST; length=681bp
TTACAGAGTAAGCTCAGATCTTCATCATTGATCTTAATCACATCAGCACT
TTCCCATTGGCTGATGCCTCAAGTTATAAACATACAAAGCAAAGAAAAGG
GAACAGCCCAAGGGCAGTCTTACACATAACACAGATAACAAGGACTAGAT
ACGCAACTGCAAATTCACCTCCGAAAAACTCACAACGGTTTCTTACAAGA
GGAGAAAGAAATTAAAATTAAAGGTTCCATGATGGACCGGAAACAAACAC
TTTATTCACAAAACCTCACAACATTATCTCATTATTCGCATCAACCATCC
ATCACAACCACCTAAATACAACTACTTTTTTGCCAGAGTTTATTTGCATG
CACACAGCTGATGAGTGATGATGCCTGTTATTACCAAATTAAGCATCAGC
AGTCTCAGCAGAATCAGCTGCAGCTAAGATCAGCTCAGGGTGAACGCCTC
CCACATATGTACCGTCTAATGCATTCGGCTGGCCCAGTGACTTCAACGCC
AAATGCGCAGCCTTCTGCCCCGATATCATCATTGCTCCAAATGTTGGCCC
CATTCGAGGAGCACCATCAATCTCGGCAACTTCCATGCCGGTAACTATCA
TACCAGGCACAACCTCCCTGGTCAGCCTCACAATAGCATCTTCTGCAGAG
TTCATGTCCAGTGCCTTCATTCCAGGCACTT
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