DN621005

Overview
NameDN621005
Unique NameDN621005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.822e-35
Identity = 77/190 (40.53%), Postives = 109/190 (57.37%), Query Frame = -1
Query:  162 AWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVP 728
            AWW E+  VGHGD K +PWW  ++T ++L+E    ++W+ S  HAAVNFGQY YGG   NRPT +R     E  S E +    + PE   L T   + +    + ++++LS H+ DE YLG ++    W  D     AF++F  KL E+E  +  +N D  LRNR G   +PY LL P SE G+T +G+P
Sbjct:  661 AWWKELVEVGHGDLKDKPWWQKMQTREELVEASAILIWIASALHAAVNFGQYPYGGLILNRPTISR-RFMPEKGSPE-YDALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIP 848          
BLAST of DN621005 vs. ExPASy Swiss-Prot
Match: AOSL_PLEHO (Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12
Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = -1
Query:  177 KDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVT 650
            + L E++T++V+  S  HAAVNF Q  + G+ PN P   R       P  ++ +  L+    ++L+T PS+ QA K +A + +L+  S DE YLG     AW +   ++ A  +F+ KL ++           K++ RN    VPY  L P   P  T
Sbjct:  926 EQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLR-----HPPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDI---------SKKIKQRNENLEVPYIYLLPERIPNGT 1064          
The following BLAST results are available for this feature:
BLAST of DN621005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
LOX4_SOYBN6.822e-3540.53Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]
AOSL_PLEHO2.789e-1231.65Allene oxide synthase-lipoxygenase protein OS=Plex... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621005 ID=DN621005; Name=DN621005; organism=Citrus sinensis; type=EST; length=728bp
CTTTTTTTTTTTTAGAGAATAATTACTTAATAATATAACACCGACAGCAA
CATTAACTGCAATTTATTTGATTCATTCTTGAACTCATTCTCAAAAGTTT
TTATTGATACAACATTCGAGCGATTGCAACAACATTTTCAACTCTAGATA
GAGATGCTGTACGGAACTCCTTTTCCTGTAACACCAGGTTCCGAAAATGG
CTTCAAGAGCTCATATGGCACCATCCCAGCTCCATTTCTATTCCTCAACT
TGGGATCTGCATTCCTTGCATCAATAATCCCTTCAAGCTCCATTAACTTG
CCTCTAAACTTTTCAAATGCTGCATTTATAACCGGATCCTCACGCCATGC
TGGCTCTATTTCTTTTCCTAAATACTCCTCATCAGGAGAATGAGTCGATA
AAACATCAAGAATAGCCATAACTTTAGTAGCTTGAATCTGGGAAGGGAAG
GTATTCAAAAGTGCATTTTCAGGTTTTTCAAGGAAGAATTTCCATTGTTC
ATCAGATGGATCTTCAGTGGCAATGTTGCATCTTGCAGTGGTTGGCCTAT
TGGGGAAATAGCCTCCGTAAGTGTATTGGCCGAAGTTAACAGCTGCGTGG
TGACCAGATGTTACCCAAACAATAGTTGTGATGATTTCAATTAAATCCTT
AGGGGTTTTCAAGACAGGCCACCAAGGTTCATGTTTCTTGTCACCGTGTC
CCACAGTTCGAATTTCAGTCCACCAAGC
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