DN621004

Overview
NameDN621004
Unique NameDN621004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.392e-11
Identity = 52/164 (31.71%), Postives = 84/164 (51.22%), Query Frame = -2
Query:  137 IMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 625
            I+ NNAG T D +   + D+   E+  +++ NL   +  +K   R M  A  G II+  SV G +G A    YA++K GL G  +  A E+G   I VN V+P  + T + ++  +   + L G      G + + E+IA+   +L SD +  V+G  + V+GG
Sbjct:   85 IVVNNAGITRDNLLVRMKDD---EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIP--LGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGG 243          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 47/179 (26.26%), Postives = 88/179 (49.16%), Query Frame = -2
Query:  113 GKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLK----LADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIVNAGF 637
            GKL+I+ NNAG V  +     D  + ++  I+  N   A+  ++ A  ++K +  G++I  +S+ G     +   Y++SK  +  + K+ A E  +  IRVN V+P V+ TPL +  +K      ++    +     G   +P++++    +L    +  ++G  +  DGGF   N GF
Sbjct:   98 GKLNILVNNAGVV--IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT-ANGGF 273          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 54/164 (32.93%), Postives = 86/164 (52.44%), Query Frame = -2
Query:  137 NAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGR----GSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 613
            NAG T D   P + D D   ++R+L  NL G F    H   +M P  R    G I+   SV G+IG      Y++SK G++G  K  AVEL +  I VNCV+P ++ T +  + + + D+ L  + +   G   +PE++A A  +L  +++  V+   + V+GG
Sbjct:   87 NAGLTRDNAFPALTDED---WDRVLRTNLDG-FYNVLHP--IMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDILDENVPI-DEILKMIPAGRMG---DPEEVAHAVNFLMGEKAAYVTRQVIAVNGG 240          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DHK2_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 2 OS=Streptomyces violaceoruber GN=gra-orf6 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 54/177 (30.51%), Postives = 86/177 (48.59%), Query Frame = -2
Query:  137 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAE-FERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKD---FLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 655
            TAV  YG+LD++ NNAG    +    L     E +  IL +N++G +  T  A   +  +G GS+++ +S+ G     ++  YA S  G     +  A  +G   +RVN V+P ++ TP  ++   F  +A+           G    PED+AEA   LG   +   +G  L+VDGG
Sbjct:   75 TAVEHYGRLDVLVNNAGRTRAIPHADLAAATPEVWREILGLNVIGTWQTTVAAMPHLARSGNGSVVNVSSIAGSRPAGSSIPYAVSNGGHRAQTRLLANTVGP-AVRVNAVAPGLIETPWTQNSDFFAPIAEHVRQTTPLRRTG---RPEDVAEAV--LGLVRATYTTGQVLLVDGG 245          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: CBR4_RAT (Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = -2
Query:  128 LSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 544
            L  NL+G  L  + A R M   G GSI++  S+ G+ G     AY+++K GL+G  ++ A E+ R  IRVN V+P  + T + K   +           N+  G   E  ++A A ++L   ES  ++GH L+VDGG  +
Sbjct:  104 LHTNLLGTMLTCRAAMRTMIQQG-GSIVNVGSIIGLKGNVGQAAYSATKGGLIGFSRSLAKEVARKKIRVNVVAPGFIHTDMTKHLKE------EHFKKNIPLGRFGEALEVAHAVVFL--LESPYITGHVLIVDGGLQL 234          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11
Identity = 51/169 (30.18%), Postives = 87/169 (51.48%), Query Frame = -2
Query:  179 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLV----GAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAV--ELGRFGIRVNCVSPYVVSTPLAKDFLKLADDG-----LGGMYSNLK-GAVLEPEDIAEAALYLGSDE 649
            V  +G+LDI+ NNAG           N++  +E+ L INLV    G +LG  + ++     G G II+ +S+ G++  A    Y +SKHG++G  ++ A+  +L   G+R+N + P  V+T + +   K  + G      G +   +K   +L+PE IA   + L  D+
Sbjct:   79 VDYFGRLDILVNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSKQHGGEG-GVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICPGFVNTSILQSIEKEENMGPYIEYTGHIKDMMKCYGILDPEMIANGLITLIEDD 236          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DCXR_TRIRE (L-xylulose reductase OS=Trichoderma reesei GN=lxr1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11
Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = -2
Query:  134 VTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATH--AYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGF 649
            V+ +GK+D    NAG        ++D   ++++ ++ ++L G     K      K  G GS++ TAS+ G +        +Y  +K G + L ++ A E   F  RVN +SP  + T L+ DF+   D+    ++ ++   G   + +++  A +YL SD S   +G ++V+DGG+
Sbjct:   95 VSDFGKIDAFIANAGAT--ANSGVVDGSASDWDHVIQVDLSGTAYCAKAVGAHFKKQGHGSLVITASMSGHVANYPQEQTSYNVAKAGCIHLARSLANEWRDFA-RVNSISPGYIDTGLS-DFI---DEKTQELWRSMIPMGRNGDAKELKGAYVYLVSDASSYTTGADIVIDGGY 263          
The following BLAST results are available for this feature:
BLAST of DN621004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
FABG_PSEAE4.392e-1131.713-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
TRN1_DATST5.737e-1126.26Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
FABG_AGGAC5.737e-1132.933-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
DHK2_STRVN7.492e-1130.51Granaticin polyketide synthase putative ketoacyl r... [more]
CBR4_RAT7.492e-1133.57Carbonyl reductase family member 4 OS=Rattus norve... [more]
PGDH_CAVPO9.785e-1130.1815-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ca... [more]
DCXR_TRIRE9.785e-1127.27L-xylulose reductase OS=Trichoderma reesei GN=lxr1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621004 ID=DN621004; Name=DN621004; organism=Citrus sinensis; type=EST; length=656bp
TTTTTTTTTTTTCATAGTAAAAAGCAGTAAAATCGAAGCTCAATTACGAA
TTATTAGGATCAAAACATGCAAGCTTCCGAAAATACACTCATTCAGATTT
CCCAAACACAGAAAACCCTGCATTGACAATAGCAAATCCTCCATCTACGA
CCAAATTATGCCCACTCACACACTTAGACTCATCACTCCCCAAATAAAGA
GCAGCTTCAGCTATATCCTCAGGCTCAAGAACAGCCCCCTTAAGATTTGA
ATACATGCCGCCCAAACCATCATCAGCAAGCTTGAGAAAATCCTTAGCTA
ATGGAGTTGAGACCACATAAGGTGACACACAATTGACCCTAATGCCAAAT
CGTCCAAGCTCCACAGCAGTATTCTTCATCAGCCCCAAAAGGCCATGCTT
TGAACTAGCGTATGCATGTGTTGCAGCGCCACCAATGATTCCGCAAACGC
TCGCAGTTGAAATTATGCTGCCTCGTCCGGCGGGTTTCATCACCCTAGCA
GCATGTTTCGTCCCCAAAAATGCGCCAACGAGGTTAATGGAAAGTATGCG
CTCAAATTCAGCCTGATCGTTATCGAGTATGTTAGGTTTGACTTCATCCA
CAGTGCCGGCGTTATTGAACATAATGTCTAGCTTTCCGTACTGAGTGACT
GCCGTG
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