DN621004

Overview
NameDN621004
Unique NameDN621004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17
Identity = 59/175 (33.71%), Postives = 93/175 (53.14%), Query Frame = -2
Query:  125 QYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL-KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGGFAIV 643
            ++G++DI+ NNAG T D +   + D    E+  I+  NL   F  +K   R M     G II+  SV G +G      YA++K GL+G  K+ A E+   GI VN V+P  + T + +    L+DD   G+ + +  G +   ++IA A  +L SDE+  ++G  L V+GG  +V
Sbjct:   76 EFGEVDILVNNAGITRDNLLMRMKDE---EWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR---ALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV 244          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17
Identity = 56/178 (31.46%), Postives = 95/178 (53.37%), Query Frame = -2
Query:  128 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLG-SDESKCVSGHNLVVDGGFAI 655
            TAV ++G +D++ NNAG   +    ++   +++++ ++ +NL G FL T+ A ++M    +G II+ ASV G+IG      YA++K G++G  K  A E     I VN V P  +++ +     KL +D    +   +  G   +PE +A    +L  S  S  ++GH   + GGFAI
Sbjct:  145 TAVDKWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGFAI 317          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17
Identity = 59/172 (34.30%), Postives = 90/172 (52.33%), Query Frame = -2
Query:  137 QYGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGG--MYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 643
            ++ K+DI+ NNAG T D +   + ++D   ++ ++S NL   +       R M  A  GSII+ AS+   IG A    YA++K G++   K+ A E+    IRVNC++P  + T    D   + +D L    + S   G    PED+A  AL+L S  S  ++   LVVDGG
Sbjct:   81 KHNKIDILVNNAGITRDNLLMRMSEDD---WQSVISTNLTSLYYTCSSVIRHMIKARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIET----DMTSVLNDNLKAEWLKSIPLGRAGTPEDVARVALFLASQLSSYMTAQTLVVDGG 245          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 57/176 (32.39%), Postives = 96/176 (54.55%), Query Frame = -2
Query:  137 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 655
            TA+ ++G LD+M NNAG  + V  + L  D   + +++  NL GAFLG++ A +       +G++I+ +SV  +I       YA+SK G+  + +  A+E    GIRVN + P  ++TP+  +  K AD        ++   G + +PE++A  A +L S ++  V+G  L  DGG
Sbjct:   78 TAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAE--KFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGG 249          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 57/176 (32.39%), Postives = 97/176 (55.11%), Query Frame = -2
Query:  137 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 655
            +++ ++GKLD+M NNAG  + V  +  +   +++ +++  NL GAFLG++ A +       +G++I+ +SV   I       YA+SK G+  + +  A+E    GIRVN + P  ++TP+  +  K AD        ++   G + EPE+IA  A +L S E+  V+G  L  DGG
Sbjct:   78 SSIKEFGKLDVMINNAGMENPVSSH--EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE--KFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DHB8_PIG (Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN=HSD17B8 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 51/149 (34.23%), Postives = 89/149 (59.73%), Query Frame = -2
Query:  137 ILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 580
            +L   + ++++++++NL G FL T+ AA+ +  +G  GSII+ +S+ G +G      YA+SK G++GL +  A ELGR+ IR N V P  + TP+A+   +   D + GM     G +  P D+A+   +L S++S  ++G ++ V GG
Sbjct:  110 LLRMSEDDWDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISSIIGKVGNMGQTNYAASKAGVIGLTQAVARELGRYRIRCNSVLPGFIKTPMAQKVPQKVLDKVVGMIP--MGHLGGPPDVADVVAFLASEDSGYITGASVEVTGG 256          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17
Identity = 56/173 (32.37%), Postives = 92/173 (53.18%), Query Frame = -2
Query:  128 YGKLDIMFNNAG-TVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLKGAVL-EPEDIAEAALYLGSDESKCVSGHNLVVDGGFAI 640
            +  +DI+ NNAG T D +   I+   + E++ +++INL G F  TK   R M     G II+ +S+ G+ G      Y ++K G++GL K++A EL    I VN ++P  +ST +     KLA D    M   +  A   EP D++    +L S+ ++ ++G  L +DGG  +
Sbjct:   80 FSTIDILVNNAGITRDNL---IMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTD---KLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMVM 246          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = -2
Query:  128 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAGRGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNLK-GAVLEPEDIAEAALYLG-SDESKCVSGHNLVVDGGFAI 655
            TAV  +G +D++ NNAG   +    ++   +++++ ++ +NL G FL T+ A ++M    +G II+ ASV G+IG      YA++K G++G  K  A E     I VN V P  +++ +     KL +D    +   +  G   +PED+A    +L  S  +  ++G    +DGG AI
Sbjct:  156 TAVDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGGIAI 328          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17
Identity = 57/176 (32.39%), Postives = 96/176 (54.55%), Query Frame = -2
Query:  137 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 655
            TA+ ++G LD+M NNAG  + V  + L  D   + +++  NL GAFLG++ A +       +G++I+ +SV  +I       YA+SK G+  + +  A+E    GIRVN + P  ++TP+  +  K AD        ++   G + +PE++A  A +L S ++  V+G  L  DGG
Sbjct:   78 TAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAE--KFADPEQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGG 249          
BLAST of DN621004 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17
Identity = 58/176 (32.95%), Postives = 95/176 (53.98%), Query Frame = -2
Query:  137 TAVTQYGKLDIMFNNAGTVDEVKPNILDNDQAEFERILSINLVGAFLGTKHAARVMKPAG-RGSIISTASVCGIIGGAATHAYASSKHGLLGLMKNTAVELGRFGIRVNCVSPYVVSTPLAKDFLKLADDGLGGMYSNL--KGAVLEPEDIAEAALYLGSDESKCVSGHNLVVDGG 655
            TAV ++G LD+M NNAG  + V  + L  +   + +++  NL GAFLG++ A +       +G++I+ +SV  +I       YA+SK G+  + +  A+E    GIRVN + P  + TP+  +  K AD        ++   G + +PE+IA  A +L S ++  V+G  L  DGG
Sbjct:   78 TAVKEFGSLDVMINNAGVENPVPSHELSLEN--WNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAE--KFADPEQRADVESMIPMGYIGKPEEIASVAAFLASSQASYVTGITLFADGG 249          
The following BLAST results are available for this feature:
BLAST of DN621004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
FABG_ECOLI3.140e-1733.713-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG5_BRANA3.140e-1731.463-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
FABG_CHLPN4.102e-1734.303-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHG3_BACME5.357e-1732.39Glucose 1-dehydrogenase 3 OS=Bacillus megaterium G... [more]
DHG1_BACME5.357e-1732.39Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
DHB8_PIG5.357e-1734.23Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN... [more]
FABG_BACSU6.996e-1732.373-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
FABG2_BRANA6.996e-1730.903-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
DHGA_BACME6.996e-1732.39Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHG2_BACME6.996e-1732.95Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621004 ID=DN621004; Name=DN621004; organism=Citrus sinensis; type=EST; length=656bp
TTTTTTTTTTTTCATAGTAAAAAGCAGTAAAATCGAAGCTCAATTACGAA
TTATTAGGATCAAAACATGCAAGCTTCCGAAAATACACTCATTCAGATTT
CCCAAACACAGAAAACCCTGCATTGACAATAGCAAATCCTCCATCTACGA
CCAAATTATGCCCACTCACACACTTAGACTCATCACTCCCCAAATAAAGA
GCAGCTTCAGCTATATCCTCAGGCTCAAGAACAGCCCCCTTAAGATTTGA
ATACATGCCGCCCAAACCATCATCAGCAAGCTTGAGAAAATCCTTAGCTA
ATGGAGTTGAGACCACATAAGGTGACACACAATTGACCCTAATGCCAAAT
CGTCCAAGCTCCACAGCAGTATTCTTCATCAGCCCCAAAAGGCCATGCTT
TGAACTAGCGTATGCATGTGTTGCAGCGCCACCAATGATTCCGCAAACGC
TCGCAGTTGAAATTATGCTGCCTCGTCCGGCGGGTTTCATCACCCTAGCA
GCATGTTTCGTCCCCAAAAATGCGCCAACGAGGTTAATGGAAAGTATGCG
CTCAAATTCAGCCTGATCGTTATCGAGTATGTTAGGTTTGACTTCATCCA
CAGTGCCGGCGTTATTGAACATAATGTCTAGCTTTCCGTACTGAGTGACT
GCCGTG
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